Click here to switch to the map view.

The map label for this gene is ssuA [H]

Identifier: 107022788

GI number: 107022788

Start: 1362205

End: 1363194

Strand: Reverse

Name: ssuA [H]

Synonym: Bcen_1235

Alternate gene names: 107022788

Gene position: 1363194-1362205 (Counterclockwise)

Preceding gene: 107022789

Following gene: 107022784

Centisome position: 41.38

GC content: 67.78

Gene sequence:

>990_bases
ATGTCGTCAATGTCGGCGGCACGTCGCCGCCTGCTGCTTGCCGGCGCCGCCATCGCGGCGCACCCATTGGCCGCGTTCGC
CGCGCCGGCCGCCGACGCCGATCTGGCCGGCACGACGTTGCGCGTCGCGACCTACAAGGGCGGTTGGCGCGCGCTGTTGC
AGGCGGCCGGGCTCGCCGACATGCCGTACCGGATCGACTGGCGCGAACTGAACAACGGCGTGCTGCATATCGAGGCACTC
AACGCGGACGCGCTCGATATCGGTTCGGGTAGCGAAATTCCGGCCGTGTTCGCCGCGCGCCAGAAGGCCAACGTGCGATT
CATCTCGCGCGTGCGCGAAGACCTGAACAACCAGGTCACGCTCGCGCGCAAGGACACGCCGATCCGCGGCATCGCGGATC
TGAAGGGCAAGCGCGTCGGCTACGTGCGCGCGACGACGTCGCACTATTTCCTGTATCGACAGCTGGCGGAAGCCGGCCTG
ACCTTCGACGACATCCAGCCGATCAACCTGTCGCCGACCGACGGGCTGTCCGCGTACGATCGCGGCGACATCGATGCGTG
GGCGATCTACGGCTACAACGGCCAGCTCGCGCGCAATCGCTACGACGCCCGTGTGCTGAAGACGGGGAAGGGGTATCTGT
CGGGCAATTTTCCGGTGTACGCGAATCCGCGCACGCTCGACGATGCGCGTCGCCGCGCGGCGACGGGCGATCTGCTGCTG
CGGTTTCGACGTGCGTATGCGTGGGCGAACGGGCATTTCCGCGACTATGCGCTCGCGCAGAATCGCGAGACGCGTGTGCC
GGTTGCCGATCTCGTCGCGATGTTCGACCAGCGCAGCGAAGACTTCGCGCTGCTGCCGGTGACGCCCGACGTGGTCGCGC
AGCACCAGCAGGTCGCGGACGTGTTTGCCCGCATCGGCGTGCTGGACGGGCCGGCCCATGTCGCGCCGTTCTGGGACACG
TCGTTCAATCCGCTGGTTGCGGCGGGGTGA

Upstream 100 bases:

>100_bases
GCGCCGCATCCTCGAACTGCTGGCCGAGCGCCACGGTTTTCCGGCGCTGCATTGACGCGACGGTTTCACTTCCTTCTCAT
CCGATCGACAGGAGCATCCG

Downstream 100 bases:

>100_bases
TGCGGTGAAACGGGAGGTGCGGGCGGGGTCGCTCGATATGTGCCGGTTCGCGTTCGTCAAACGGCGAAAATCCGCCGCTG
GTAGTCGAGGATCAGGCGAT

Product: ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSSMSAARRRLLLAGAAIAAHPLAAFAAPAADADLAGTTLRVATYKGGWRALLQAAGLADMPYRIDWRELNNGVLHIEAL
NADALDIGSGSEIPAVFAARQKANVRFISRVREDLNNQVTLARKDTPIRGIADLKGKRVGYVRATTSHYFLYRQLAEAGL
TFDDIQPINLSPTDGLSAYDRGDIDAWAIYGYNGQLARNRYDARVLKTGKGYLSGNFPVYANPRTLDDARRRAATGDLLL
RFRRAYAWANGHFRDYALAQNRETRVPVADLVAMFDQRSEDFALLPVTPDVVAQHQQVADVFARIGVLDGPAHVAPFWDT
SFNPLVAAG

Sequences:

>Translated_329_residues
MSSMSAARRRLLLAGAAIAAHPLAAFAAPAADADLAGTTLRVATYKGGWRALLQAAGLADMPYRIDWRELNNGVLHIEAL
NADALDIGSGSEIPAVFAARQKANVRFISRVREDLNNQVTLARKDTPIRGIADLKGKRVGYVRATTSHYFLYRQLAEAGL
TFDDIQPINLSPTDGLSAYDRGDIDAWAIYGYNGQLARNRYDARVLKTGKGYLSGNFPVYANPRTLDDARRRAATGDLLL
RFRRAYAWANGHFRDYALAQNRETRVPVADLVAMFDQRSEDFALLPVTPDVVAQHQQVADVFARIGVLDGPAHVAPFWDT
SFNPLVAAG
>Mature_328_residues
SSMSAARRRLLLAGAAIAAHPLAAFAAPAADADLAGTTLRVATYKGGWRALLQAAGLADMPYRIDWRELNNGVLHIEALN
ADALDIGSGSEIPAVFAARQKANVRFISRVREDLNNQVTLARKDTPIRGIADLKGKRVGYVRATTSHYFLYRQLAEAGLT
FDDIQPINLSPTDGLSAYDRGDIDAWAIYGYNGQLARNRYDARVLKTGKGYLSGNFPVYANPRTLDDARRRAATGDLLLR
FRRAYAWANGHFRDYALAQNRETRVPVADLVAMFDQRSEDFALLPVTPDVVAQHQQVADVFARIGVLDGPAHVAPFWDTS
FNPLVAAG

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=299, Percent_Identity=31.1036789297659, Blast_Score=121, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 36013; Mature: 35882

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSMSAARRRLLLAGAAIAAHPLAAFAAPAADADLAGTTLRVATYKGGWRALLQAAGLAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCC
MPYRIDWRELNNGVLHIEALNADALDIGSGSEIPAVFAARQKANVRFISRVREDLNNQVT
CCEEEEHHHCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCEE
LARKDTPIRGIADLKGKRVGYVRATTSHYFLYRQLAEAGLTFDDIQPINLSPTDGLSAYD
EEECCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC
RGDIDAWAIYGYNGQLARNRYDARVLKTGKGYLSGNFPVYANPRTLDDARRRAATGDLLL
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCEECCCCCEEECCCCHHHHHHHHHHHHHHH
RFRRAYAWANGHFRDYALAQNRETRVPVADLVAMFDQRSEDFALLPVTPDVVAQHQQVAD
HHHHHHHHCCCCEEEEHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
VFARIGVLDGPAHVAPFWDTSFNPLVAAG
HHHHHCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SSMSAARRRLLLAGAAIAAHPLAAFAAPAADADLAGTTLRVATYKGGWRALLQAAGLAD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCC
MPYRIDWRELNNGVLHIEALNADALDIGSGSEIPAVFAARQKANVRFISRVREDLNNQVT
CCEEEEHHHCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCEE
LARKDTPIRGIADLKGKRVGYVRATTSHYFLYRQLAEAGLTFDDIQPINLSPTDGLSAYD
EEECCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC
RGDIDAWAIYGYNGQLARNRYDARVLKTGKGYLSGNFPVYANPRTLDDARRRAATGDLLL
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCEECCCCCEEECCCCHHHHHHHHHHHHHHH
RFRRAYAWANGHFRDYALAQNRETRVPVADLVAMFDQRSEDFALLPVTPDVVAQHQQVAD
HHHHHHHHCCCCEEEEHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
VFARIGVLDGPAHVAPFWDTSFNPLVAAG
HHHHHCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]