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The map label for this gene is yebA [C]

Identifier: 107022693

GI number: 107022693

Start: 1239671

End: 1240936

Strand: Reverse

Name: yebA [C]

Synonym: Bcen_1140

Alternate gene names: 107022693

Gene position: 1240936-1239671 (Counterclockwise)

Preceding gene: 107022694

Following gene: 107022673

Centisome position: 37.67

GC content: 69.59

Gene sequence:

>1266_bases
TTGGTCAAGTCCGTCGCAACCCCTGATGCCGTCGCACCCGGTCGCGCGCAGCGCGTCGTGCGCACGCTCGTGCCGGCCGC
CGTGCTCGGCGCCCTCGCCGCATTCGGCCTCGCCGCCGCGTTGCCGGCCGTGTCGCAACTGCCGGGCGCCGTCGATTCAG
GCACGGCCGCGCTGCCGCAGCGCGTGCTGTCCGATACGCCGTTTCCCACCGCGCAGCATTTCGTGACGAGCGAGCTCGCC
CGCACGATCGGCGAGCGCAACGAACACCTCGATCGCAATGACCGCAGTGTGCAGCCGGGCCTGTTCGCGCCGCTCAGCGC
GCATCGCAACGACATGCTCGGCTATACGAGCCTGTTTCAGTTCGCGGCGCCCGACCACCAGCAAGGCATGCGCGCGGGCG
ACATCGAACTCACGCTGTCCGATACGCTGAACCGTCTCGACGTGCCGCCCGAAGTGCGCATCCAGCTCGGCGATCTCGTC
ACCGGCAAGGTCGCGATGCGCGCGAGTGCGCAGCGCGGCGACTATTACCGCGTCGCGCTCGACACGAACGACGGCACGCC
GCGCCTCACCGCGCTCGAGCTGCGCGTCGCCGGCCGCACGTTCGGCGCGATCTGGTTCCGCGCGCCGGGCGCCGAGCACG
GTGCGTACTACGCGCTCGACGGCTCGCCGCTCGAAGCCGCCGCATTCACGATGCCGGTCAAGTGGACGCGTATCAGTTCG
TTCTTCGGCGAGCGCATCCATCCGCTGTCGCAGGCGATGGCGTTTCATACGGGCGTCGATCTCGCCGCACCGAGCGGCAC
GCCGGTCGATGCGGCCGCCGACGGCGTCGTGTCGTTCGTCGGCACCGATCCGGGCGGCTATGGGCGCTATGTGATCGTCG
ATCATGCGGATGGCTATTCGACCTACTACGCGCACCTGTCCGCGTTCGCTCGCGGGCTCAAGACCGGCGAAACGGTGAAG
CAGGGGCAACGTATCGGCTCGGTCGGGATGACGGGCGCGGCGACCGGCCCGCACCTGCATTTCGAGGTGCGGGTCGCGAA
CGATCCGGTCGACCCGCTCGTCACGCTGGCCAGCGCGCAGAGGGCGCTGTCGGACATGCAGCTCACCGCGTTCCGCCAGG
AAGCCGCGCAATGGCGCTTGCACCTCGCATCGATCAGCACCACGCCGTTCGCGTTCGCGCAGAACGACGGCCCGCTGTGG
GGCGATTTCGCGACCGGCCCGTCGACGCTGCGCGCGGTGTTCGATACGCACTACAGCGCGTCCTGA

Upstream 100 bases:

>100_bases
TTTGTTGCACGCCCGCCGCCCGCCCCGTCGCCGTTTGACGGTGCGCCGCCGGCGGCCCCCGCCCACACCCCTTTGAACCG
CTTTCCTGGATGTGGACACC

Downstream 100 bases:

>100_bases
CGCTGACGTCCTGAAGCGTCCGGGCACCTCAGCCTCATCGGCACCACCGCACGCGTCGCCGCTCGAATGACGGCGACGCA
GCCCGCTGCGGATGGTCGCA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MVKSVATPDAVAPGRAQRVVRTLVPAAVLGALAAFGLAAALPAVSQLPGAVDSGTAALPQRVLSDTPFPTAQHFVTSELA
RTIGERNEHLDRNDRSVQPGLFAPLSAHRNDMLGYTSLFQFAAPDHQQGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLV
TGKVAMRASAQRGDYYRVALDTNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISS
FFGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYSTYYAHLSAFARGLKTGETVK
QGQRIGSVGMTGAATGPHLHFEVRVANDPVDPLVTLASAQRALSDMQLTAFRQEAAQWRLHLASISTTPFAFAQNDGPLW
GDFATGPSTLRAVFDTHYSAS

Sequences:

>Translated_421_residues
MVKSVATPDAVAPGRAQRVVRTLVPAAVLGALAAFGLAAALPAVSQLPGAVDSGTAALPQRVLSDTPFPTAQHFVTSELA
RTIGERNEHLDRNDRSVQPGLFAPLSAHRNDMLGYTSLFQFAAPDHQQGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLV
TGKVAMRASAQRGDYYRVALDTNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISS
FFGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYSTYYAHLSAFARGLKTGETVK
QGQRIGSVGMTGAATGPHLHFEVRVANDPVDPLVTLASAQRALSDMQLTAFRQEAAQWRLHLASISTTPFAFAQNDGPLW
GDFATGPSTLRAVFDTHYSAS
>Mature_421_residues
MVKSVATPDAVAPGRAQRVVRTLVPAAVLGALAAFGLAAALPAVSQLPGAVDSGTAALPQRVLSDTPFPTAQHFVTSELA
RTIGERNEHLDRNDRSVQPGLFAPLSAHRNDMLGYTSLFQFAAPDHQQGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLV
TGKVAMRASAQRGDYYRVALDTNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISS
FFGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYSTYYAHLSAFARGLKTGETVK
QGQRIGSVGMTGAATGPHLHFEVRVANDPVDPLVTLASAQRALSDMQLTAFRQEAAQWRLHLASISTTPFAFAQNDGPLW
GDFATGPSTLRAVFDTHYSAS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=190, Percent_Identity=37.8947368421053, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082174, Length=111, Percent_Identity=39.6396396396396, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1789099, Length=111, Percent_Identity=34.2342342342342, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 44737; Mature: 44737

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSVATPDAVAPGRAQRVVRTLVPAAVLGALAAFGLAAALPAVSQLPGAVDSGTAALPQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RVLSDTPFPTAQHFVTSELARTIGERNEHLDRNDRSVQPGLFAPLSAHRNDMLGYTSLFQ
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
FAAPDHQQGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLVTGKVAMRASAQRGDYYRVAL
HCCCCHHCCCCCCCEEEEHHHHHHHCCCCHHHEEEECCEEECHHHHHHHCCCCCEEEEEE
DTNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISS
ECCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCHHEEECCCCHHHHHH
FFGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYS
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCH
TYYAHLSAFARGLKTGETVKQGQRIGSVGMTGAATGPHLHFEVRVANDPVDPLVTLASAQ
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH
RALSDMQLTAFRQEAAQWRLHLASISTTPFAFAQNDGPLWGDFATGPSTLRAVFDTHYSA
HHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
S
C
>Mature Secondary Structure
MVKSVATPDAVAPGRAQRVVRTLVPAAVLGALAAFGLAAALPAVSQLPGAVDSGTAALPQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RVLSDTPFPTAQHFVTSELARTIGERNEHLDRNDRSVQPGLFAPLSAHRNDMLGYTSLFQ
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
FAAPDHQQGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLVTGKVAMRASAQRGDYYRVAL
HCCCCHHCCCCCCCEEEEHHHHHHHCCCCHHHEEEECCEEECHHHHHHHCCCCCEEEEEE
DTNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISS
ECCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCHHEEECCCCHHHHHH
FFGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYS
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCH
TYYAHLSAFARGLKTGETVKQGQRIGSVGMTGAATGPHLHFEVRVANDPVDPLVTLASAQ
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH
RALSDMQLTAFRQEAAQWRLHLASISTTPFAFAQNDGPLWGDFATGPSTLRAVFDTHYSA
HHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]