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The map label for this gene is nodJ [H]

Identifier: 107022668

GI number: 107022668

Start: 1211309

End: 1212142

Strand: Reverse

Name: nodJ [H]

Synonym: Bcen_1115

Alternate gene names: 107022668

Gene position: 1212142-1211309 (Counterclockwise)

Preceding gene: 107022669

Following gene: 107022663

Centisome position: 36.79

GC content: 67.39

Gene sequence:

>834_bases
ATGGACGTTCGCAACTATTCCACCACCACGCCGTCGGCCCCGCTGCGCGAGTCGCGCTTCGCGATCGCGATGCCGGCGAA
CGCAAGCAACTGGATCGCCGTCTGGCGGCGCAACTATCTCGTGTGGCGCAAGCTCGCGCTCGCATCGATGTTCGGCAATC
TCGCCGATCCGATGATCTATCTGTTCGGGCTGGGGTTCGGGCTCGGGCTGATGCTCGGCCATGTCGACGGCGTGTCGTAT
ATCGCGTTCCTCGCGGCCGGCACGGTCGGCTCGAGCGTGATGATGTCCGCGAGCTTCGAGTCGATGTATTCGGGATTCTC
GCGGATGCACGTGCAGCGCACGTGGGAAGCGATCATGCATACGCCGCTCGCGCTCGGCGACATCGTGCTCGGCGAGATCG
TGTGGGCGGCCAGCAAGGCGCTGCTGTCGGGCGGCGCGATCATGCTCGTCGCGGGCGGGCTCGGCTATGCGCAGTTTCCG
TCGATGCTCGCCGCGCTGCCGGTGATCGCGCTGGCCGGCCTCGCGTTCGCCAGCATCGCGATGATCGTCACGGCGCTCGC
GCCGTCCTACGATTTCTTCATGTTCTACCAGACGCTCGTGCTGACGCCGATGCTGCTGCTGTCGGGCGTGTTCTTCCCGA
TCACGCAGTTGCCGCCGCTTGCGCAGCACGCGGCGCAGGCGCTGCCGCTCGCGAATGCGGTCGAACTGATCCGGCCCGCG
ATGCTCGGCCGGCCGGCGACCGACATCGCGCTGCACGTCGCGGTGCTCGCCGGTTACGCGGTCGGCGGATTCCTGCTGTC
CGCGTGGCTGTTCCGGCGGCGGATGATGCGCTGA

Upstream 100 bases:

>100_bases
ACTCAAGGGCCGTCCGGGGTTGCGCTATCTGCATCGCCCGGCCAATCTGGAGGATGTGTTCCTGCGGCTCACGGGCCGCG
AGATGCAGGACTGATCGACC

Downstream 100 bases:

>100_bases
CGGCCGGCGCGCCGGACACCGGGCGCCGGCTTCATGCGACGACGTTACTCGTCGTCGTCGCTCCACGGAATTTCAACGTC
GGTCAGGAACGCCACGGTCG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDVRNYSTTTPSAPLRESRFAIAMPANASNWIAVWRRNYLVWRKLALASMFGNLADPMIYLFGLGFGLGLMLGHVDGVSY
IAFLAAGTVGSSVMMSASFESMYSGFSRMHVQRTWEAIMHTPLALGDIVLGEIVWAASKALLSGGAIMLVAGGLGYAQFP
SMLAALPVIALAGLAFASIAMIVTALAPSYDFFMFYQTLVLTPMLLLSGVFFPITQLPPLAQHAAQALPLANAVELIRPA
MLGRPATDIALHVAVLAGYAVGGFLLSAWLFRRRMMR

Sequences:

>Translated_277_residues
MDVRNYSTTTPSAPLRESRFAIAMPANASNWIAVWRRNYLVWRKLALASMFGNLADPMIYLFGLGFGLGLMLGHVDGVSY
IAFLAAGTVGSSVMMSASFESMYSGFSRMHVQRTWEAIMHTPLALGDIVLGEIVWAASKALLSGGAIMLVAGGLGYAQFP
SMLAALPVIALAGLAFASIAMIVTALAPSYDFFMFYQTLVLTPMLLLSGVFFPITQLPPLAQHAAQALPLANAVELIRPA
MLGRPATDIALHVAVLAGYAVGGFLLSAWLFRRRMMR
>Mature_277_residues
MDVRNYSTTTPSAPLRESRFAIAMPANASNWIAVWRRNYLVWRKLALASMFGNLADPMIYLFGLGFGLGLMLGHVDGVSY
IAFLAAGTVGSSVMMSASFESMYSGFSRMHVQRTWEAIMHTPLALGDIVLGEIVWAASKALLSGGAIMLVAGGLGYAQFP
SMLAALPVIALAGLAFASIAMIVTALAPSYDFFMFYQTLVLTPMLLLSGVFFPITQLPPLAQHAAQALPLANAVELIRPA
MLGRPATDIALHVAVLAGYAVGGFLLSAWLFRRRMMR

Specific function: Part of the ABC transporter complex nodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- InterPro:   IPR005981 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29799; Mature: 29799

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRNYSTTTPSAPLRESRFAIAMPANASNWIAVWRRNYLVWRKLALASMFGNLADPMIY
CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGLGFGLGLMLGHVDGVSYIAFLAAGTVGSSVMMSASFESMYSGFSRMHVQRTWEAIMH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLALGDIVLGEIVWAASKALLSGGAIMLVAGGLGYAQFPSMLAALPVIALAGLAFASIA
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MIVTALAPSYDFFMFYQTLVLTPMLLLSGVFFPITQLPPLAQHAAQALPLANAVELIRPA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
MLGRPATDIALHVAVLAGYAVGGFLLSAWLFRRRMMR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVRNYSTTTPSAPLRESRFAIAMPANASNWIAVWRRNYLVWRKLALASMFGNLADPMIY
CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGLGFGLGLMLGHVDGVSYIAFLAAGTVGSSVMMSASFESMYSGFSRMHVQRTWEAIMH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLALGDIVLGEIVWAASKALLSGGAIMLVAGGLGYAQFPSMLAALPVIALAGLAFASIA
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MIVTALAPSYDFFMFYQTLVLTPMLLLSGVFFPITQLPPLAQHAAQALPLANAVELIRPA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
MLGRPATDIALHVAVLAGYAVGGFLLSAWLFRRRMMR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]