| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is pld [H]
Identifier: 107022658
GI number: 107022658
Start: 1201247
End: 1201975
Strand: Reverse
Name: pld [H]
Synonym: Bcen_1105
Alternate gene names: 107022658
Gene position: 1201975-1201247 (Counterclockwise)
Preceding gene: 107022659
Following gene: 107022652
Centisome position: 36.48
GC content: 64.61
Gene sequence:
>729_bases GTGCCGATCATCGCGTGGACCAGCGCTTCGCATCCGCACGTGACCGGGCCGCCACGCGTGCGTTACACTCACGGCCCGCT GTCTCGAAATTATTCGCTGTCCAAGATGTTGTCGCGCAATCGCCTCGCTGCCGCCTGTCTCGCCGCTTCCCTGCTCGCCA CCCCGTTCGCCGCCTTCGGCAAGACGCAAAACGAATCGCTGCTCCAGCAAGCGATCGATCTCGTGTCGCGATGGCTGCCG GCTCCTACTCACGAAGCACCCGCGACCCAGGTCGTCGAATCGGCCTTCTCGCCGGACGGCGGCGCCGAGGCGCTCGTACT GAAAGCGATCGGCGCGGCGCGCAACTCGATCCGGGTTGCCGCCTACTCGTTCACGTCGCCGCCCGTCACGCGTGCATTGC TTGCCGCCAAGCGCCGCGGCGTCAATGTCGCGGTGGTCGTCGACGACAAGGGCAACCGCGCGAAGAACAGCAAGCAGGCA CTGAACCTGCTCGTCAACGCGGGCATTCCGACGCGCACGATCGACGCCTATGCGATCCATCACGACAAGTACCTCGTGAT CGACGCCGAGCACGTCGAAACGGGTTCGTTCAACTACAGCGCGTCGGCAGCCAGCCGCAATTCCGAGAACGTCGTCGTGG TCTGGAACAATCCGCAACTCGCGTCGCGCTACCTCACGCACTGGCAAAGCCGCTTCGATCAAGGCACGCCGTACCGCTCC AGCTACTGA
Upstream 100 bases:
>100_bases AACGCAAGCGCATGCCATCGCGGCCCGATCCGCTATCCGTCGATCGCCCCGCTCGCACACGCGGGCTGCACGACGCAACT TTGCGTCACCCTCTCCACCC
Downstream 100 bases:
>100_bases CGCGCGACACGCGCTCGCCGCCCCACCGCTCACATTCGCGTCACCGTGTTGCAGATGATCGGCGAGCATGGCGCGATGTT CAATTCGGCCGAATGGCCAG
Product: phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases like enzyme
Products: NA
Alternate protein names: PLD; Choline phosphatase [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPIIAWTSASHPHVTGPPRVRYTHGPLSRNYSLSKMLSRNRLAAACLAASLLATPFAAFGKTQNESLLQQAIDLVSRWLP APTHEAPATQVVESAFSPDGGAEALVLKAIGAARNSIRVAAYSFTSPPVTRALLAAKRRGVNVAVVVDDKGNRAKNSKQA LNLLVNAGIPTRTIDAYAIHHDKYLVIDAEHVETGSFNYSASAASRNSENVVVVWNNPQLASRYLTHWQSRFDQGTPYRS SY
Sequences:
>Translated_242_residues MPIIAWTSASHPHVTGPPRVRYTHGPLSRNYSLSKMLSRNRLAAACLAASLLATPFAAFGKTQNESLLQQAIDLVSRWLP APTHEAPATQVVESAFSPDGGAEALVLKAIGAARNSIRVAAYSFTSPPVTRALLAAKRRGVNVAVVVDDKGNRAKNSKQA LNLLVNAGIPTRTIDAYAIHHDKYLVIDAEHVETGSFNYSASAASRNSENVVVVWNNPQLASRYLTHWQSRFDQGTPYRS SY >Mature_241_residues PIIAWTSASHPHVTGPPRVRYTHGPLSRNYSLSKMLSRNRLAAACLAASLLATPFAAFGKTQNESLLQQAIDLVSRWLPA PTHEAPATQVVESAFSPDGGAEALVLKAIGAARNSIRVAAYSFTSPPVTRALLAAKRRGVNVAVVVDDKGNRAKNSKQAL NLLVNAGIPTRTIDAYAIHHDKYLVIDAEHVETGSFNYSASAASRNSENVVVVWNNPQLASRYLTHWQSRFDQGTPYRSS Y
Specific function: Could be a virulence factor [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 26231; Mature: 26100
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIIAWTSASHPHVTGPPRVRYTHGPLSRNYSLSKMLSRNRLAAACLAASLLATPFAAFG CCEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KTQNESLLQQAIDLVSRWLPAPTHEAPATQVVESAFSPDGGAEALVLKAIGAARNSIRVA CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE AYSFTSPPVTRALLAAKRRGVNVAVVVDDKGNRAKNSKQALNLLVNAGIPTRTIDAYAIH EEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEE HDKYLVIDAEHVETGSFNYSASAASRNSENVVVVWNNPQLASRYLTHWQSRFDQGTPYRS CCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCC SY CC >Mature Secondary Structure PIIAWTSASHPHVTGPPRVRYTHGPLSRNYSLSKMLSRNRLAAACLAASLLATPFAAFG CEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KTQNESLLQQAIDLVSRWLPAPTHEAPATQVVESAFSPDGGAEALVLKAIGAARNSIRVA CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE AYSFTSPPVTRALLAAKRRGVNVAVVVDDKGNRAKNSKQALNLLVNAGIPTRTIDAYAIH EEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEE HDKYLVIDAEHVETGSFNYSASAASRNSENVVVVWNNPQLASRYLTHWQSRFDQGTPYRS CCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCC SY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA