| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022647
Identifier: 107022647
GI number: 107022647
Start: 1191887
End: 1192957
Strand: Reverse
Name: 107022647
Synonym: Bcen_1094
Alternate gene names: NA
Gene position: 1192957-1191887 (Counterclockwise)
Preceding gene: 107022650
Following gene: 107022646
Centisome position: 36.21
GC content: 55.93
Gene sequence:
>1071_bases ATGGAGACCGGAATGGTGAAGGCGGCGTTGAAGGTAATCGGCAGGCCGATCTGGAAGCGGATGCAGTTCCGTATCAATGC CGCGATCGATGGACGTATCGAACGTGACCGAGCAGAAATTGAACGGCTTAAGCAGGTGATCGTTGGCCTACAAAAAATGG TCGAATCCCTGTACCTCGAGCGCGGGTGCGAAAGCGAACATTTCGATCTGGACAAGCGCATTGCCCATGCGATCGGGCAA CGAATCTTCGTTCCATCCGACCCGGTCTTCGACGATCAAGCGCCGTTCATGCAGTATTCGACGTGCAGCGCAGCCGATAT GCTTCACCCGGAGCATGCCCGAATTTGCGCGATGCTCGGCCTCCCTCCGATGTACCAGCGAAAATTTTGGGAATGGACAT ACATCATCCATCATCTGAATCGGCTAGGCATGCTCAAACCAGGCAGGCGCGGACTTGGTTTCGGCGTGGGTCAGGAGCGG TTGCCGGCGCTTTTCGCGAAGCTGGGATGCTCGATCGTCGCCACTGATGCGCCGCCGGAAATCGGACAATCTAGCGGATG GTCCCAAACCGGACAACATAGCAGTGCTCTCGACGAGCTACGGTTCCCGGCCATTGTGGCCGATAAAATCTTCGATCGGT CAGTGACGCATCAGTATTGCGACATGAACGCCATTGCCCCGTCGCTCCGCGATTTTGATTTCAACTGGTCGTCCTGCTGC TTCGAGCACCTTGGCAATCTGGAGGCCGGACTGCAGTTCGTCATCAACAGCATGGACACACTGAAGCCCGGTGGGGTTGC GGTTCACACGACGGAATACAATCTTTCGTCGAACGACGACACTTCCCGCGAAGGTGGGACCGTGATTTATCGAAAACGCG ATATGGAAGAACTCGTCACGCGATTGCGCGACCGAGGATACGAGGTTGAGACGTTCGCGCCGGCACCACACGCACACGCG CTCGATTTTCATGTCGACGCACCGCCATATAGCAATAACCCTCATCTCAAATTGAGGTTGGCCGGCTATACAACCACTTC AGCCGGGATATGCGTACGTCGCATTGGCTGA
Upstream 100 bases:
>100_bases CGGTCCTTCATCTCCCGAAAATGAAGGACCATCATAGCGACGGTCGATTGTTGATAGTTCTTACTTAACGTAAGATCGTC AACATCCCCGCACCACATCG
Downstream 100 bases:
>100_bases TGCCCTACCTAGTCGACGGTTCCGCGTATCCTCGACCTTCATCTGGCGAAGCATCGGCGCACCAAGGTCGCCGGCGCCGA TCGCGTTGTGCTTGTTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues METGMVKAALKVIGRPIWKRMQFRINAAIDGRIERDRAEIERLKQVIVGLQKMVESLYLERGCESEHFDLDKRIAHAIGQ RIFVPSDPVFDDQAPFMQYSTCSAADMLHPEHARICAMLGLPPMYQRKFWEWTYIIHHLNRLGMLKPGRRGLGFGVGQER LPALFAKLGCSIVATDAPPEIGQSSGWSQTGQHSSALDELRFPAIVADKIFDRSVTHQYCDMNAIAPSLRDFDFNWSSCC FEHLGNLEAGLQFVINSMDTLKPGGVAVHTTEYNLSSNDDTSREGGTVIYRKRDMEELVTRLRDRGYEVETFAPAPHAHA LDFHVDAPPYSNNPHLKLRLAGYTTTSAGICVRRIG
Sequences:
>Translated_356_residues METGMVKAALKVIGRPIWKRMQFRINAAIDGRIERDRAEIERLKQVIVGLQKMVESLYLERGCESEHFDLDKRIAHAIGQ RIFVPSDPVFDDQAPFMQYSTCSAADMLHPEHARICAMLGLPPMYQRKFWEWTYIIHHLNRLGMLKPGRRGLGFGVGQER LPALFAKLGCSIVATDAPPEIGQSSGWSQTGQHSSALDELRFPAIVADKIFDRSVTHQYCDMNAIAPSLRDFDFNWSSCC FEHLGNLEAGLQFVINSMDTLKPGGVAVHTTEYNLSSNDDTSREGGTVIYRKRDMEELVTRLRDRGYEVETFAPAPHAHA LDFHVDAPPYSNNPHLKLRLAGYTTTSAGICVRRIG >Mature_356_residues METGMVKAALKVIGRPIWKRMQFRINAAIDGRIERDRAEIERLKQVIVGLQKMVESLYLERGCESEHFDLDKRIAHAIGQ RIFVPSDPVFDDQAPFMQYSTCSAADMLHPEHARICAMLGLPPMYQRKFWEWTYIIHHLNRLGMLKPGRRGLGFGVGQER LPALFAKLGCSIVATDAPPEIGQSSGWSQTGQHSSALDELRFPAIVADKIFDRSVTHQYCDMNAIAPSLRDFDFNWSSCC FEHLGNLEAGLQFVINSMDTLKPGGVAVHTTEYNLSSNDDTSREGGTVIYRKRDMEELVTRLRDRGYEVETFAPAPHAHA LDFHVDAPPYSNNPHLKLRLAGYTTTSAGICVRRIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40077; Mature: 40077
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METGMVKAALKVIGRPIWKRMQFRINAAIDGRIERDRAEIERLKQVIVGLQKMVESLYLE CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RGCESEHFDLDKRIAHAIGQRIFVPSDPVFDDQAPFMQYSTCSAADMLHPEHARICAMLG CCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCEECCCCCHHHHCCCHHHHHHHHHC LPPMYQRKFWEWTYIIHHLNRLGMLKPGRRGLGFGVGQERLPALFAKLGCSIVATDAPPE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC IGQSSGWSQTGQHSSALDELRFPAIVADKIFDRSVTHQYCDMNAIAPSLRDFDFNWSSCC CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHCCCCCHHHHH FEHLGNLEAGLQFVINSMDTLKPGGVAVHTTEYNLSSNDDTSREGGTVIYRKRDMEELVT HHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHH RLRDRGYEVETFAPAPHAHALDFHVDAPPYSNNPHLKLRLAGYTTTSAGICVRRIG HHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECC >Mature Secondary Structure METGMVKAALKVIGRPIWKRMQFRINAAIDGRIERDRAEIERLKQVIVGLQKMVESLYLE CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RGCESEHFDLDKRIAHAIGQRIFVPSDPVFDDQAPFMQYSTCSAADMLHPEHARICAMLG CCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCEECCCCCHHHHCCCHHHHHHHHHC LPPMYQRKFWEWTYIIHHLNRLGMLKPGRRGLGFGVGQERLPALFAKLGCSIVATDAPPE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC IGQSSGWSQTGQHSSALDELRFPAIVADKIFDRSVTHQYCDMNAIAPSLRDFDFNWSSCC CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHCCCCCHHHHH FEHLGNLEAGLQFVINSMDTLKPGGVAVHTTEYNLSSNDDTSREGGTVIYRKRDMEELVT HHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHH RLRDRGYEVETFAPAPHAHALDFHVDAPPYSNNPHLKLRLAGYTTTSAGICVRRIG HHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA