| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
Click here to switch to the map view.
The map label for this gene is rstB [H]
Identifier: 107022425
GI number: 107022425
Start: 945214
End: 946623
Strand: Reverse
Name: rstB [H]
Synonym: Bcen_0870
Alternate gene names: 107022425
Gene position: 946623-945214 (Counterclockwise)
Preceding gene: 107022426
Following gene: 107022420
Centisome position: 28.73
GC content: 68.09
Gene sequence:
>1410_bases ATGCTGCGCCCGTTGCTCCGGTTGTACCTCGTCGTGATCCTGTTCGTCGGTGCGTCGATCATCTTCATCCAGCTGTCGTT CGACCGGATCTTCTATGAACGCGGCGCGCAGGCGCAGCGCGATTCGCTGACGACCTATTCGTTCGTGCTGAACGACTACC TCGAACGCCATCCGGGCGCGCAGCGCGAGCTCGCATTGCGCGAACTCGCGCTGCATGGCCGCGAAGGATTCGGCTTCATG TCGATGGCCGACGCGCGTGCGCAACTGAGCGGCGCGCCGTTGCGCGATCTCGATGCCGGCAGGATCGCGATCAGCTACAA CGGCAAGGATTACTACATGCCGCTCGCGGACGGCTCGGTGCTGCATGCCCGCCCGATCGAAGCGCCCGACCTCGACATCC GGATCTATGCGTACATGCTGCTCGCGCTCGCGACGCTGTTCGCGGTCGTGCTGTGGATTCACTATCACTGGCGCGACATT CGCCGGCTGCAGGATGCCGCGCGCGCGTTCGGCGCCGGAATGCTGTCGACACGCGTGAAGCTGTCGGGCAAGTCGAACAT CTACGAGCTGTCGCAGCAGTTCAACGACATGGCCGCGCGTATCGAGGCGTCGATCAAGCAGCAGCGCGAAATGATGCACG GCATCTCGCATGAACTGAAAACGCCGCTCGCCCGGCTCGAATTCGGGCTCGCGCTGCTCGCCGACGCCGACGAGACGGGC CGGATGCGCGACGCGCTGCGACGCGACGTGCGCGAACTCGACGAGCTCGTCACCGAGTTGCTGACGATCGGCCGGCTCGA ACAGGGTGCGAGCGAGCTCGCGCCGATGGAAGTCGTCGTCGATGCGCTGATCGACAGCGTCGCCGGCAACGTCGCGGACG ACATCGCCGATCGCGGCATCGCGCTCGACGTGTCGACGTTCGACGCGCCCGCGACCCACGTCTGCGATCCGAAGCTCGTC GCCCGCGCGCTGCTGAACCTGATTCGCAACGGCGCCCGCTATGCGTCGCGCAAGGTCGTGCTGGCCGCGACCCGCGACCC GTCCGGCGCGCTCGTGCTGAGCGTCGACGACGATGGCCCCGGCATTCCGGCCGCCGAACGCGCCCGCGTGTTCGAGCCGT TCCAGCGGCTGGATTCGAGCCGCGACCGTCAGACCGGCGGTTTCGGGCTCGGGCTCGCGATCGTGCGGCGCGTCGCGCAG GTGCACGGCGGCGACGTGCGGCTCGAGGATTCGCCGCTCGGCGGCGCGCGCTTCGTGATCACGCTGCCCGTGCGTGCGCT GCCGGACAGTCTGTTCGACGTCGCGCAGCACGTGGAAAGCACGCATGCCGATGCGCGCCGCCGCAGCGGCACGGGACGGT CGTCCCGCTTCGATGAAAACGGCGGCGGGCGCCTACCCGCCCCCGCGTGA
Upstream 100 bases:
>100_bases GCTGCGCCGCCGCTTCGAGGATGCGTCATCGGAGCCGCACAAGATCAAGACGATCTGGGGTCGCGGCTACCTGTTCAGCC CTTCTGCGTGGGACGAGTAA
Downstream 100 bases:
>100_bases CCGCGCCTTCGCTCAGCGCCGGCGCAACAGCGCGACGAAGAACAGGCTGCCGAACAGCGCGGTCACGATGCCGATCGGCA GGTCCTCCGGCGCCGCGAGC
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGAQRELALRELALHGREGFGFM SMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSVLHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDI RRLQDAARAFGAGMLSTRVKLSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG RMRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGIALDVSTFDAPATHVCDPKLV ARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRRVAQ VHGGDVRLEDSPLGGARFVITLPVRALPDSLFDVAQHVESTHADARRRSGTGRSSRFDENGGGRLPAPA
Sequences:
>Translated_469_residues MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGAQRELALRELALHGREGFGFM SMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSVLHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDI RRLQDAARAFGAGMLSTRVKLSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG RMRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGIALDVSTFDAPATHVCDPKLV ARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRRVAQ VHGGDVRLEDSPLGGARFVITLPVRALPDSLFDVAQHVESTHADARRRSGTGRSSRFDENGGGRLPAPA >Mature_469_residues MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGAQRELALRELALHGREGFGFM SMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSVLHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDI RRLQDAARAFGAGMLSTRVKLSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG RMRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGIALDVSTFDAPATHVCDPKLV ARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRRVAQ VHGGDVRLEDSPLGGARFVITLPVRALPDSLFDVAQHVESTHADARRRSGTGRSSRFDENGGGRLPAPA
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=294, Percent_Identity=37.4149659863946, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI1790346, Length=265, Percent_Identity=35.4716981132075, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789808, Length=290, Percent_Identity=30.6896551724138, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=31.25, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786912, Length=242, Percent_Identity=30.5785123966942, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1786600, Length=241, Percent_Identity=28.6307053941909, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1786783, Length=298, Percent_Identity=30.2013422818792, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1788713, Length=305, Percent_Identity=24.9180327868852, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI145693157, Length=240, Percent_Identity=23.75, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI87081816, Length=279, Percent_Identity=27.2401433691756, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082128, Length=296, Percent_Identity=27.027027027027, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=28.2608695652174, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1790551, Length=269, Percent_Identity=27.8810408921933, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790861, Length=238, Percent_Identity=28.9915966386555, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787374, Length=298, Percent_Identity=23.8255033557047, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=24.6963562753036, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=25.3275109170306, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789403, Length=235, Percent_Identity=26.3829787234043, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51621; Mature: 51621
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGA CCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC QRELALRELALHGREGFGFMSMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCE LHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDIRRLQDAARAFGAGMLSTRVK EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEE LSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH RMRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ALDVSTFDAPATHVCDPKLVARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGP EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCEEEEEECCCCC GIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRRVAQVHGGDVRLEDSPLGGARFVI CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEE TLPVRALPDSLFDVAQHVESTHADARRRSGTGRSSRFDENGGGRLPAPA EECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGA CCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC QRELALRELALHGREGFGFMSMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCE LHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDIRRLQDAARAFGAGMLSTRVK EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEE LSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH RMRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ALDVSTFDAPATHVCDPKLVARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGP EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCEEEEEECCCCC GIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRRVAQVHGGDVRLEDSPLGGARFVI CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEE TLPVRALPDSLFDVAQHVESTHADARRRSGTGRSSRFDENGGGRLPAPA EECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]