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The map label for this gene is 107022082

Identifier: 107022082

GI number: 107022082

Start: 565810

End: 566934

Strand: Reverse

Name: 107022082

Synonym: Bcen_0524

Alternate gene names: NA

Gene position: 566934-565810 (Counterclockwise)

Preceding gene: 107022083

Following gene: 107022076

Centisome position: 17.21

GC content: 63.11

Gene sequence:

>1125_bases
TTGTCGGGTGTATTCGTTACCGCAGCCCATGCTCAAAGCAGCGTTACGCTGTACGGCCTGATCGATGCAGGCATCACCTA
CACGAACAATCAGGGCGGGCATAGCTCATGGTCGGAGCGCAGCGGCCAGATCAACGGCAGCCGCTGGGGCCTGCGCGGCA
CGGAAGATCTCGGCGGCGGACTGAAAGCCATCTTCGTGTTGGAGAACGGCTTCAACATCGCCAACGGCACGCTGGGCCAA
AATGGCCGCGAGTTCGGCCGCCAGGCGTTCGTCGGCCTGTCGCAAGACCAGTTTGGCTCCCTCACCCTCGGTCGCCAATA
CGATAGCGTCGTCGATTACATCGGGCCGCTGTCGCTGACCGGCACGCAATTCGGCGGCACTCAATTTGCCCACCCGTTCG
ACAACGACAACCTGAACAATTCGTTCCGGATCAATAACTCGGTCAAATATACGAGCGTCAATTTCGGCGGCCTGAAGTTC
GGCGCGTTGTACGGCTTCTCGAACAGCAACCAGTTCTCGAACAACCGTGCATACAGCGCGGGGGTGTCGTACACCTACGC
CGGCTTCAACATCGGCGCCGGCTACCTGCAGTTGAACAATGACACCTCGGGGCTCACGGCAGCTGCGGTCACCAACAGCG
CCGGCGCGGTGGCAGGCGACAACACGTTCGTCGGCAAGCGTCAGCGCGTGTTCGGCGGCGGCCTGAACTACACGTTCGGC
CCCGCCACGGCCGGCTTCGTATTCACGCAAACGCGTGTGAACCGGGCGCTCGGCATCTCCGCGGGCGCCTCGGGCGTGTC
GAGCGGCCTGGGTCTCGACGGCACGTTCGCCCGCTTCAACAACTACGAAGTGAACGCGCGCTACGCGCTCACGCCGGCCT
TGTCGCTGGCCGGGTCGTACACGTACACCGCCGGCTTCCTGGACGGCCGTCATCCGGGCTGGAATCAGTTCAACCTGCAG
ACCGACTATGCGCTGTCCAAGCGGACCGACGTGTATGTGCAAGGCGTGTATCAGCGAGTCAGCACGGACGGCCTGGGCAT
CGGCGCCTATGTCAATGGCCTCGGTGGCGCTTCGTCGACCAACAAGCAGATCGCGGTGACCGCCGGCCTGCGCCATCGCT
TCTGA

Upstream 100 bases:

>100_bases
GGCTACAGCGTCAAGCAAAACACGGCCAGTCCGCCGCAGGTTCGATCGACATCATCCTGTTTGGAGACAGATCCATGAAA
AAACCCTGATCGTCACCGCG

Downstream 100 bases:

>100_bases
GCAACCGGCAACGCCAACGCCAACGCAACGTACACGCGAATAAAAAAGCGCCCCATCGGGGCGCTTTTTCTTGGCTGCGT
CGGACCGATATGCTCAGGCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGGLKAIFVLENGFNIANGTLGQ
NGREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYTSVNFGGLKF
GALYGFSNSNQFSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVFGGGLNYTFG
PATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSYTYTAGFLDGRHPGWNQFNLQ
TDYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASSTNKQIAVTAGLRHRF

Sequences:

>Translated_374_residues
MSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGGLKAIFVLENGFNIANGTLGQ
NGREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYTSVNFGGLKF
GALYGFSNSNQFSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVFGGGLNYTFG
PATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSYTYTAGFLDGRHPGWNQFNLQ
TDYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASSTNKQIAVTAGLRHRF
>Mature_373_residues
SGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGGLKAIFVLENGFNIANGTLGQN
GREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNSVKYTSVNFGGLKFG
ALYGFSNSNQFSNNRAYSAGVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVFGGGLNYTFGP
ATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSYTYTAGFLDGRHPGWNQFNLQT
DYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASSTNKQIAVTAGLRHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39443; Mature: 39312

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGG
CCCEEEEEECCCCCEEEEEEEECCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCHHHCCC
LKAIFVLENGFNIANGTLGQNGREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLT
EEEEEEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCEEC
GTQFGGTQFAHPFDNDNLNNSFRINNSVKYTSVNFGGLKFGALYGFSNSNQFSNNRAYSA
CCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEC
GVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVFGGGLNYTFG
CCEEEEECEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEC
PATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSY
CCCCCEEEEHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCEEEEEEEEECHHHHHCCCC
TYTAGFLDGRHPGWNQFNLQTDYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASST
EEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHCCCCCEEEHEECCCCCCCCC
NKQIAVTAGLRHRF
CCEEEEEECCCCCC
>Mature Secondary Structure 
SGVFVTAAHAQSSVTLYGLIDAGITYTNNQGGHSSWSERSGQINGSRWGLRGTEDLGGG
CCEEEEEECCCCCEEEEEEEECCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCHHHCCC
LKAIFVLENGFNIANGTLGQNGREFGRQAFVGLSQDQFGSLTLGRQYDSVVDYIGPLSLT
EEEEEEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCEEC
GTQFGGTQFAHPFDNDNLNNSFRINNSVKYTSVNFGGLKFGALYGFSNSNQFSNNRAYSA
CCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEC
GVSYTYAGFNIGAGYLQLNNDTSGLTAAAVTNSAGAVAGDNTFVGKRQRVFGGGLNYTFG
CCEEEEECEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEC
PATAGFVFTQTRVNRALGISAGASGVSSGLGLDGTFARFNNYEVNARYALTPALSLAGSY
CCCCCEEEEHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCEEEEEEEEECHHHHHCCCC
TYTAGFLDGRHPGWNQFNLQTDYALSKRTDVYVQGVYQRVSTDGLGIGAYVNGLGGASST
EEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHCCCCCEEEHEECCCCCCCCC
NKQIAVTAGLRHRF
CCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]