| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022042
Identifier: 107022042
GI number: 107022042
Start: 524581
End: 525120
Strand: Reverse
Name: 107022042
Synonym: Bcen_0484
Alternate gene names: NA
Gene position: 525120-524581 (Counterclockwise)
Preceding gene: 107022044
Following gene: 107022041
Centisome position: 15.94
GC content: 54.26
Gene sequence:
>540_bases TTGCGCCGGAGAAACATCATGGAACAACAGGCAAAACACTGGATGCTTGTCAGTGACGTCATTCGCAAGGACGCTCCTTA TTTCGGCGCGATCGGCATCGTATTTGCCATCGTTCAACTGGTCGGCTTCCGGCTTGGTATGCATGATCTGGGCACTGATC TCATGATGGAACAGATCGTGTTTAAAGGTGTCTTGCTGGGCTTAATGTTCATATGGTTGCTCCGCTTCCCGGTGGAGTTG ATGAAGCTGAAACGCAATCGTTCATTTCCATGGCTCGAGAGGCTGATCGACCGAGCCGCACAACGAACTGTGTCTGCCGC AGTCGCAGCTGCGATGGTAATAGGCGGCACCGCCATCGTCGCGGCCTTTGACCGCGACTATCGTGCCGCAAGTCTGTTCG TCTACGCATTCGTTTATTTCATCGCTATAGCGGAAGCAGCCGCCAACCCTCTGCTGGAAACTTCTCGGCAGTCGCGAATG CAATCCGCTGCCATGGGCGTCCTCATTGGCCTTCCGTTTGGTGTCTCCCTTGTCGCGTAA
Upstream 100 bases:
>100_bases GCCGCGCCGCAAGCGGCGCGTTCAGGCCCATGATTGTACGCGCAACTTTCAGGCACTATGGCGAGTGCCGCTACGGGCCT ATCATCGATATTGACCTTCA
Downstream 100 bases:
>100_bases GCGCTCTTCCGACTCGGATCTACTTGCACTCCCCAAACCAAATCTCCACCGAATCACGTAATGACCGCTTTCCTGCTGAT CTGGAGCCCCAAGAAATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MRRRNIMEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLLGLMFIWLLRFPVEL MKLKRNRSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRM QSAAMGVLIGLPFGVSLVA
Sequences:
>Translated_179_residues MRRRNIMEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLLGLMFIWLLRFPVEL MKLKRNRSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRM QSAAMGVLIGLPFGVSLVA >Mature_179_residues MRRRNIMEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLLGLMFIWLLRFPVEL MKLKRNRSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRM QSAAMGVLIGLPFGVSLVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19984; Mature: 19984
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRNIMEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIV CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKGVLLGLMFIWLLRFPVELMKLKRNRSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRMQSAAMGVLIGLPFGVSLVA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MRRRNIMEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIV CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKGVLLGLMFIWLLRFPVELMKLKRNRSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRMQSAAMGVLIGLPFGVSLVA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA