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The map label for this gene is ubiD [H]

Identifier: 107022031

GI number: 107022031

Start: 512962

End: 514617

Strand: Reverse

Name: ubiD [H]

Synonym: Bcen_0473

Alternate gene names: 107022031

Gene position: 514617-512962 (Counterclockwise)

Preceding gene: 107022033

Following gene: 107022030

Centisome position: 15.62

GC content: 68.0

Gene sequence:

>1656_bases
ATGGCTGCCCGGGGTAAAATCGTCGGTCAATTCGGGGTCGCAGCCGGCCGCTGCCCCGCCCATCGCTGCCCGCTCATGCG
GGTTGCCCGGACCTTCTTCATGAAATACAAAGACTTACGCGATTTCATTCAGCGCCTAGAGGCGCTCGGCGAACTGCGGC
GCGTCACCCAGCCCGTGTCGCCCGTGCTCGAAATGACCGAGCTGTGCGACCGCGTGCTGCGCGCCGGCGGCCCCGCGCTG
CTGTTCAACGCGCCGCCCGGCAATGCATTTCCGGTACTCGGCAACCTGTTCGGCACGCCGCGCCGCGTCGCGCTCGGGAT
GGGCGTCGATGCGGGCGACGATGCCGCGCTCGGCTCGCTGCGCGATCTCGGACGCCTGCTGTCCGCACTGAAGGAGCCCG
ATCCGCCGAAGAGCCTGAAGGACGCCGGCAAGCTGCTGTCGCTCGCGAAGGCGGTGTGGGACATGGCGCCGAAGTCGGTG
TCGTCGCCGCCGTGCCAGGAGATCGTCTGGGAAGGCGCCGACGTCGACCTGAACAAGCTGCCGATCCAGACCTGCTGGCC
CGGCGATGCGGGGCCGCTCGTCACGTGGGGCCTGACGGTCACGCGTGGGCCGAACAAGTCGCGCCAGAATCTCGGCATCT
ACCGCCAGCAGCTGATCGGCCGCAACAAGCTGATCATGCGCTGGCTCGCGCATCGCGGCGGCGCGCTGGATTTCCGCGAA
TTCGCGCTGCAGAACCCCGGCAAGCCGTATCCGGTCGCGGTCGTGCTCGGCGCCGATCCGGCCACGACGCTCGGCGCGGT
GACGCCCGTGCCTGATTCGCTGTCCGAGTACCAGTTCGCCGGCCTGCTGCGCGGCAGCCGCACGGAACTCGCGAAGTGCC
TGACGCCCGGCGTCGACACGCTGCAGGTGCCCGCGCGCGCGGAGATCGTGCTCGAAGGCTTCATTCATCCGCAGGAAGGC
GCCCCTGCCCCCGCTCCGGCCGGCGCGCCGCCGCGACCGGCGGGCAACGCGGCGGCCGCGTACGAACACGCGCTCGAAGG
GCCGTACGGCGACCACACTGGTTATTACAACGAGCAGGAGTGGTTTCCGGTGTTCACCGTCGAGCGCATCACGATGCGCC
GCGACGCGATCTACCACTCGACCTACACGGGCAAGCCGCCCGACGAGCCCGCGGTGCTCGGCGTCGCGCTCAACGAGGTG
TTCGTGCCGCTGCTGCAAAAGCAGTTCACGGAAATCACCGACTTCTACCTGCCGCCCGAAGGCTGCAGCTACCGGATGGC
CATCGTCCAGATGAAGAAGAGCTACGCGGGCCACGCGAAGCGCGTGATGTTCGGCGTGTGGAGCTTCCTGCGGCAGTTCA
TGTATACGAAGTTCATCGTGGTCGTCGACGAGGACGTGAACATCCGCGACTGGAAGGAAGTGATCTGGGCGATCACGACG
CGCGTCGACCCCGTGCGCGACACGGTGATGGTCGACAGCACGCCGATCGACTATCTCGACTTCGCGTCGCCGGTGGCCGG
ACTCGGCTCGAAGATGGGGCTCGACGCGACCAACAAGTGGCCGGGCGAAACCAGCCGCGAATGGGGCCGCCCGATCGAGA
TGGACGCGGCCGTGAAGGCGCGCGTCGACCGGCTGTGGCAGGAGATCGGCCTCTGA

Upstream 100 bases:

>100_bases
AATCTATAACAAAAAGTAATTTAAAACGCCTCTTCAGAACGCGAGCCCCGTGCCGTAGGGGGTTTGCGCGCGATCGACTT
TTTCTCCGCCGGGCGGCTAC

Downstream 100 bases:

>100_bases
CGCCAGGCAGGCCGGTGCCTGCCGGCCTGCGCATCGCAATCGCCGCAAACACCCAGAAGATGAGCTTTCCGCCCGCCTCC
ATGCTGTCCGACGGATTCTT

Product: carboxylyase-like protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MAARGKIVGQFGVAAGRCPAHRCPLMRVARTFFMKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPAL
LFNAPPGNAFPVLGNLFGTPRRVALGMGVDAGDDAALGSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSV
SSPPCQEIVWEGADVDLNKLPIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFRE
FALQNPGKPYPVAVVLGADPATTLGAVTPVPDSLSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIHPQEG
APAPAPAGAPPRPAGNAAAAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEV
FVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITT
RVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMGLDATNKWPGETSREWGRPIEMDAAVKARVDRLWQEIGL

Sequences:

>Translated_551_residues
MAARGKIVGQFGVAAGRCPAHRCPLMRVARTFFMKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPAL
LFNAPPGNAFPVLGNLFGTPRRVALGMGVDAGDDAALGSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSV
SSPPCQEIVWEGADVDLNKLPIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFRE
FALQNPGKPYPVAVVLGADPATTLGAVTPVPDSLSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIHPQEG
APAPAPAGAPPRPAGNAAAAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEV
FVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITT
RVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMGLDATNKWPGETSREWGRPIEMDAAVKARVDRLWQEIGL
>Mature_550_residues
AARGKIVGQFGVAAGRCPAHRCPLMRVARTFFMKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALL
FNAPPGNAFPVLGNLFGTPRRVALGMGVDAGDDAALGSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSVS
SPPCQEIVWEGADVDLNKLPIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREF
ALQNPGKPYPVAVVLGADPATTLGAVTPVPDSLSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIHPQEGA
PAPAPAGAPPRPAGNAAAAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVF
VPLLQKQFTEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTR
VDPVRDTVMVDSTPIDYLDFASPVAGLGSKMGLDATNKWPGETSREWGRPIEMDAAVKARVDRLWQEIGL

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=518, Percent_Identity=65.8301158301158, Blast_Score=704, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=467, Percent_Identity=24.1970021413276, Blast_Score=108, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 60515; Mature: 60384

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARGKIVGQFGVAAGRCPAHRCPLMRVARTFFMKYKDLRDFIQRLEALGELRRVTQPVS
CCCCCCEEEHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLEMTELCDRVLRAGGPALLFNAPPGNAFPVLGNLFGTPRRVALGMGVDAGDDAALGSL
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHH
RDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSVSSPPCQEIVWEGADVDLNKL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHCC
PIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFRE
CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH
FALQNPGKPYPVAVVLGADPATTLGAVTPVPDSLSEYQFAGLLRGSRTELAKCLTPGVDT
HHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCC
LQVPARAEIVLEGFIHPQEGAPAPAPAGAPPRPAGNAAAAYEHALEGPYGDHTGYYNEQE
EECCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
WFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFTEITDFYLPPE
CCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
GCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHH
RVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMGLDATNKWPGETSREWGRPIEMDAAVKA
CCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHH
RVDRLWQEIGL
HHHHHHHHHCC
>Mature Secondary Structure 
AARGKIVGQFGVAAGRCPAHRCPLMRVARTFFMKYKDLRDFIQRLEALGELRRVTQPVS
CCCCCEEEHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLEMTELCDRVLRAGGPALLFNAPPGNAFPVLGNLFGTPRRVALGMGVDAGDDAALGSL
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHH
RDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSVSSPPCQEIVWEGADVDLNKL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHCC
PIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFRE
CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH
FALQNPGKPYPVAVVLGADPATTLGAVTPVPDSLSEYQFAGLLRGSRTELAKCLTPGVDT
HHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCC
LQVPARAEIVLEGFIHPQEGAPAPAPAGAPPRPAGNAAAAYEHALEGPYGDHTGYYNEQE
EECCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
WFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFTEITDFYLPPE
CCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
GCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHH
RVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMGLDATNKWPGETSREWGRPIEMDAAVKA
CCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHH
RVDRLWQEIGL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA