Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is 107021984

Identifier: 107021984

GI number: 107021984

Start: 469698

End: 470429

Strand: Reverse

Name: 107021984

Synonym: Bcen_0426

Alternate gene names: NA

Gene position: 470429-469698 (Counterclockwise)

Preceding gene: 107021985

Following gene: 107021983

Centisome position: 14.28

GC content: 58.88

Gene sequence:

>732_bases
ATGAGCAACAAAACAGTCCAGCGGTTGATGCAGGAGACCCTGCGCGGTTACCCCATCGATTCCGAAACGCTTCGGAACAT
GGGCGTGAGCGCGGCTTTGGCGTCACATATGGTCAAGTCCGGCTGGTTACAACGCCTTTCAAAAGGTACCTACCTGCTGA
CCGGCGACACGCCCTCGCGGGACGGCATCATCGCGCATCTTGGCCGACGCGTCCCCGGCATCCATGTCGGCGGCAAAACA
GCCCTCGCCTGGCAAGGTGTTCGCCACAACATCACATTCAAAGAGAAAGTCATTCTCTGGGGCCCGAGACCTTATCGCAT
CCCCTCATGGGTCGCGGAGCACATGCGCTACACGTACCAGACCACTGCGTTGTTCGACGAATCGTTGCCCTATTCATTCG
GGCTGACGCAGCTTCCCGCCGGGGGGCCCGACGTGCTTGTTTCCGTACCGGAGCGAGCCATACTGGAGCTTGCAAGCGAC
ATCGGAAAGGGACAGTCGTTAGAGGAAGCATCCAACCTGGTGATCGGATTGCGCAACCTGCGCGTCAAAACGCTGGACGT
GCTTCTACATCACTGTACGAGCGTGAAGGTGGTACGACTGGTGCGGGATCTTGGACAGGGTGCGGACTTCCCGTGGGCGC
GAGAACTCCAGAGGCACGTCAACCGTCTCGGCGAAGGCACGCGATGGTCGAACAAAATGAAAGACGGCAAGCGACTCACA
CTCAAACCGTGA

Upstream 100 bases:

>100_bases
ACGGGATCCGGCAAATCCGGCACGGCGGCGTTATAAAATTGCATATAATCAAATATACTCTATATATACTGCAATCAGAC
AACGCCCTAGTCACGCCACG

Downstream 100 bases:

>100_bases
TGAACCAGATCTACGTAGACACCGTCCGGCTGATGCTCGCGATTGCACCGATCGTCTTCGACACGCCGCGCTTCGCGATG
AAGGGCGGTACCGCGCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSNKTVQRLMQETLRGYPIDSETLRNMGVSAALASHMVKSGWLQRLSKGTYLLTGDTPSRDGIIAHLGRRVPGIHVGGKT
ALAWQGVRHNITFKEKVILWGPRPYRIPSWVAEHMRYTYQTTALFDESLPYSFGLTQLPAGGPDVLVSVPERAILELASD
IGKGQSLEEASNLVIGLRNLRVKTLDVLLHHCTSVKVVRLVRDLGQGADFPWARELQRHVNRLGEGTRWSNKMKDGKRLT
LKP

Sequences:

>Translated_243_residues
MSNKTVQRLMQETLRGYPIDSETLRNMGVSAALASHMVKSGWLQRLSKGTYLLTGDTPSRDGIIAHLGRRVPGIHVGGKT
ALAWQGVRHNITFKEKVILWGPRPYRIPSWVAEHMRYTYQTTALFDESLPYSFGLTQLPAGGPDVLVSVPERAILELASD
IGKGQSLEEASNLVIGLRNLRVKTLDVLLHHCTSVKVVRLVRDLGQGADFPWARELQRHVNRLGEGTRWSNKMKDGKRLT
LKP
>Mature_242_residues
SNKTVQRLMQETLRGYPIDSETLRNMGVSAALASHMVKSGWLQRLSKGTYLLTGDTPSRDGIIAHLGRRVPGIHVGGKTA
LAWQGVRHNITFKEKVILWGPRPYRIPSWVAEHMRYTYQTTALFDESLPYSFGLTQLPAGGPDVLVSVPERAILELASDI
GKGQSLEEASNLVIGLRNLRVKTLDVLLHHCTSVKVVRLVRDLGQGADFPWARELQRHVNRLGEGTRWSNKMKDGKRLTL
KP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27167; Mature: 27036

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKTVQRLMQETLRGYPIDSETLRNMGVSAALASHMVKSGWLQRLSKGTYLLTGDTPSR
CCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
DGIIAHLGRRVPGIHVGGKTALAWQGVRHNITFKEKVILWGPRPYRIPSWVAEHMRYTYQ
CCHHHHHHCCCCCEEECCCCEEEECCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHH
TTALFDESLPYSFGLTQLPAGGPDVLVSVPERAILELASDIGKGQSLEEASNLVIGLRNL
HHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RVKTLDVLLHHCTSVKVVRLVRDLGQGADFPWARELQRHVNRLGEGTRWSNKMKDGKRLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEE
LKP
CCC
>Mature Secondary Structure 
SNKTVQRLMQETLRGYPIDSETLRNMGVSAALASHMVKSGWLQRLSKGTYLLTGDTPSR
CCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
DGIIAHLGRRVPGIHVGGKTALAWQGVRHNITFKEKVILWGPRPYRIPSWVAEHMRYTYQ
CCHHHHHHCCCCCEEECCCCEEEECCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHH
TTALFDESLPYSFGLTQLPAGGPDVLVSVPERAILELASDIGKGQSLEEASNLVIGLRNL
HHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RVKTLDVLLHHCTSVKVVRLVRDLGQGADFPWARELQRHVNRLGEGTRWSNKMKDGKRLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEE
LKP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA