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The map label for this gene is nahR [H]

Identifier: 107021910

GI number: 107021910

Start: 390980

End: 391924

Strand: Reverse

Name: nahR [H]

Synonym: Bcen_0352

Alternate gene names: 107021910

Gene position: 391924-390980 (Counterclockwise)

Preceding gene: 107021911

Following gene: 162218060

Centisome position: 11.9

GC content: 68.47

Gene sequence:

>945_bases
ATGGAAGACGACCGTACCGCCTCGCTCGACATCTGGCTCGTGCGCGTGCTGCGCACGCTGCTGCTCGAGCGCAGCGTCAC
GCAGACCGCGTTGCGGCTGAACCAGACGCAGCCCGCGATCAGCACTGCGCTGCGCAAGCTGCGCGAGACGCTGAACGACC
CGATTCTCGTGCGCGGCAAATCGGGCATGGTGCCGACCGAATACGGCGCGTCGCTGCTCGAAGCCGCGTCGCGTGCGCTG
CGCGAGGTCGATTTCATCGCGACGCCGCACGGCGACTTCGATCCGTCGTCCGCGCGGCGCACGTTCCGCGTCGCCGCGCC
CGACTACCTGAACGACTTCTTCATGCCGACGCTGATCGAGCGCTTTCGCGACGCGGCGCCGCATGCCCATCTGGAAATCG
ATTCGCTCAATCCCGCGCTCGACCACGCGGGCGCGCTCGAATCGGGCGCGCTCGATCTCGTGATCGGCAACTGGCCGAAG
CCCGACCCGCAGTTCGCGCGCCAGGACCTGTTCTCCGACACGATCGTGTGCCTGATGCGCGATGCGCATCCGCTTGCCCG
CGCGCCGCTCACGCGCGAAGCGTATGCATCGGCCGCGCACGTCGCACCGACGCCGTACACCGGCGACAAGCGCAACGCGA
TCGAAATCGGCCTGGCACGCGCGCGCCTCACGCGGCGTATCGTGACGACGCTGCCGTACTTCGGCATCGTGCCGCAGGTG
CTGCTGCAGTCGGACCTGATCTTCACGACGACGCGCCGCTTCGCGACGCACTATGCGCAACTGCTGCCGCTCGTCGTCGT
CACGCCGCCCGTGCCGTTCCCGCGCATCAAGAGCTACCTGCTCACGCACCCGCAACCCGATCGGCCGACCGACATCGCGT
GGCTGTGCGCGCTGATGCAGAGCGTGTCCGACGAACTGACGGTCGCCCGCACGCGCAAGCGCTGA

Upstream 100 bases:

>100_bases
CTGCCGAAGGGCCGCGCGTGATGGGGTGCGTGATGGCCGGTATCACGCACGGCAACGTGCGGCTGCGGTAAGGTTACGCG
TCCCCCGAATCCCGCCGCCC

Downstream 100 bases:

>100_bases
CGCGCGGCCCAAGCGCAGCATGACGGGGCAGGCAGCGCGACGGGTCAGGCAGCGCGGCCGCTCAGGCCGTGCAGAAGGTT
TCCTGCAGATGGGTCCAGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MEDDRTASLDIWLVRVLRTLLLERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTEYGASLLEAASRAL
REVDFIATPHGDFDPSSARRTFRVAAPDYLNDFFMPTLIERFRDAAPHAHLEIDSLNPALDHAGALESGALDLVIGNWPK
PDPQFARQDLFSDTIVCLMRDAHPLARAPLTREAYASAAHVAPTPYTGDKRNAIEIGLARARLTRRIVTTLPYFGIVPQV
LLQSDLIFTTTRRFATHYAQLLPLVVVTPPVPFPRIKSYLLTHPQPDRPTDIAWLCALMQSVSDELTVARTRKR

Sequences:

>Translated_314_residues
MEDDRTASLDIWLVRVLRTLLLERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTEYGASLLEAASRAL
REVDFIATPHGDFDPSSARRTFRVAAPDYLNDFFMPTLIERFRDAAPHAHLEIDSLNPALDHAGALESGALDLVIGNWPK
PDPQFARQDLFSDTIVCLMRDAHPLARAPLTREAYASAAHVAPTPYTGDKRNAIEIGLARARLTRRIVTTLPYFGIVPQV
LLQSDLIFTTTRRFATHYAQLLPLVVVTPPVPFPRIKSYLLTHPQPDRPTDIAWLCALMQSVSDELTVARTRKR
>Mature_314_residues
MEDDRTASLDIWLVRVLRTLLLERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTEYGASLLEAASRAL
REVDFIATPHGDFDPSSARRTFRVAAPDYLNDFFMPTLIERFRDAAPHAHLEIDSLNPALDHAGALESGALDLVIGNWPK
PDPQFARQDLFSDTIVCLMRDAHPLARAPLTREAYASAAHVAPTPYTGDKRNAIEIGLARARLTRRIVTTLPYFGIVPQV
LLQSDLIFTTTRRFATHYAQLLPLVVVTPPVPFPRIKSYLLTHPQPDRPTDIAWLCALMQSVSDELTVARTRKR

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=300, Percent_Identity=25.3333333333333, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081766, Length=275, Percent_Identity=24, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790147, Length=292, Percent_Identity=25.3424657534247, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35101; Mature: 35101

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDDRTASLDIWLVRVLRTLLLERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECC
SGMVPTEYGASLLEAASRALREVDFIATPHGDFDPSSARRTFRVAAPDYLNDFFMPTLIE
CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHH
RFRDAAPHAHLEIDSLNPALDHAGALESGALDLVIGNWPKPDPQFARQDLFSDTIVCLMR
HHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
DAHPLARAPLTREAYASAAHVAPTPYTGDKRNAIEIGLARARLTRRIVTTLPYFGIVPQV
CCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLQSDLIFTTTRRFATHYAQLLPLVVVTPPVPFPRIKSYLLTHPQPDRPTDIAWLCALMQ
HHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SVSDELTVARTRKR
HHHHHHHHHHHCCC
>Mature Secondary Structure
MEDDRTASLDIWLVRVLRTLLLERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECC
SGMVPTEYGASLLEAASRALREVDFIATPHGDFDPSSARRTFRVAAPDYLNDFFMPTLIE
CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHH
RFRDAAPHAHLEIDSLNPALDHAGALESGALDLVIGNWPKPDPQFARQDLFSDTIVCLMR
HHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
DAHPLARAPLTREAYASAAHVAPTPYTGDKRNAIEIGLARARLTRRIVTTLPYFGIVPQV
CCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLQSDLIFTTTRRFATHYAQLLPLVVVTPPVPFPRIKSYLLTHPQPDRPTDIAWLCALMQ
HHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SVSDELTVARTRKR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]