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The map label for this gene is ydhP [H]

Identifier: 107021898

GI number: 107021898

Start: 375678

End: 376847

Strand: Reverse

Name: ydhP [H]

Synonym: Bcen_0340

Alternate gene names: 107021898

Gene position: 376847-375678 (Counterclockwise)

Preceding gene: 107021899

Following gene: 107021897

Centisome position: 11.44

GC content: 69.57

Gene sequence:

>1170_bases
ATGCCCCTGCCTCTTTTCGCCCTTGCCGTCGCCGCATTTGGAATCGGTACCACCGAATTCGTGATCATGGGGCTGCTGCC
CAATGTCGCGCGCGACCTCGGCGTGTCGATCCCGGCCGCCGGGATGCTCGTGTCGGGCTACGCGCTCGGCGTGACGATCG
GCGCGCCGATCCTCGCGATCGTCACCGCGAAGATGCCGCGCAAGCGTGCGCTGATGAGCCTGATCGGGCTGTTCATCGCC
GGCAACCTGTTCTGCGCGATCGCGCCCGGCTACGCGGTGCTGATGGCCGCGCGCGTCGTCACCGCGTTCTGCCACGGTGC
GTTCTTCGGGATCGGCTCGGTGGTCGCGAGCAACCTCGTCGCACCGAACCGCCGCGCACAGGCGATCGCGCTGATGTTCA
CCGGCCTCACGCTCGCGAACGTGCTCGGCGTGCCGCTCGGCACCGCGCTCGGCCAGGCGTTAGGCTGGCGCGCGACGTTC
TGGGCCGTCACCGGCATCGGCATCGCCGCGGCCGCCGCGCTCGCGGTGTGCCTGCCGAAGAACCTCGCGATGCCCGACAC
CAGCATCACGCGCGAATTCAGCGTGCTGAAGCACCCGCAGGTGCTAATGGTGCTCGGCATCAGCGTGCTCGCGTCCGCGA
GCCTGTTCAGCGTGTTCACGTACATCACGCCGATCCTCGAGGACGTGACGGGCTTCTCGCCGCGCCAGGTCACCTACGTG
CTGCTGCTGTTCGGCCTCGGCCTGACCGTCGGCGGCACGCTCGGCGGCAAGCTCGCCGACTGGCGCCGGATGCCGTCGCT
GATCGCGACGCTCGCGCTGATCGGCATCGTCCTCGCGCTGTTCGCGGGAACGATGCATCTGCCGTTCGCCGCGCTCGCGA
CGATCTTCGTGTGGGGCATCCTGGCGTTCGCGATCGTGCCACCGCTGCAGATCATGATCGTCGATCGCGCGAGCGACGCG
CCGAACCTCGCGTCGACGCTCAACCAGGGCGCGTTCAACCTCGGCAACGCGACCGGCGCGTGGCTCGGCGGGATGGCGAT
CGGCTCGGGCGTGTCGCTCGTGAGCCTGCCGTGGGTCGGCGTCGCGATGGCGATCGCCGCGCTCGCGCTCACGCTGTGGT
CGGCGTCGCTCGAACGCCGGCCGGTGGTCGTGCCGACCGAGTACGTGTGA

Upstream 100 bases:

>100_bases
TTCACTGAAGTAGAATCGTGGCTGACGTTCGCCTCACCGACCGCCCGCCCCGCGCCTCCCGCGCCTGGCTCGAGCGGCAT
CCTTTCCCGAGCCTACCGCG

Downstream 100 bases:

>100_bases
CATCACCCTGCTGCGATCGTTGCGTACGCAACTCCATCCGATCCTGATGGCCTTCATGGACCTTTCAACGGTCGCGGTGT
AGCATCGCGGCCGATGAAAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAIVTAKMPRKRALMSLIGLFIA
GNLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQALGWRATF
WAVTGIGIAAAAALAVCLPKNLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYV
LLLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGIVLALFAGTMHLPFAALATIFVWGILAFAIVPPLQIMIVDRASDA
PNLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVSLPWVGVAMAIAALALTLWSASLERRPVVVPTEYV

Sequences:

>Translated_389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAIVTAKMPRKRALMSLIGLFIA
GNLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQALGWRATF
WAVTGIGIAAAAALAVCLPKNLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYV
LLLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGIVLALFAGTMHLPFAALATIFVWGILAFAIVPPLQIMIVDRASDA
PNLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVSLPWVGVAMAIAALALTLWSASLERRPVVVPTEYV
>Mature_388_residues
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAIVTAKMPRKRALMSLIGLFIAG
NLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQALGWRATFW
AVTGIGIAAAAALAVCLPKNLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYVL
LLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGIVLALFAGTMHLPFAALATIFVWGILAFAIVPPLQIMIVDRASDAP
NLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVSLPWVGVAMAIAALALTLWSASLERRPVVVPTEYV

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=381, Percent_Identity=45.4068241469816, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI1786595, Length=386, Percent_Identity=35.4922279792746, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1787808, Length=398, Percent_Identity=30.4020100502513, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI145693198, Length=337, Percent_Identity=27.0029673590504, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40080; Mature: 39948

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAI
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]