Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is 107021870

Identifier: 107021870

GI number: 107021870

Start: 350866

End: 351345

Strand: Reverse

Name: 107021870

Synonym: Bcen_0312

Alternate gene names: NA

Gene position: 351345-350866 (Counterclockwise)

Preceding gene: 107021871

Following gene: 107021869

Centisome position: 10.66

GC content: 58.33

Gene sequence:

>480_bases
ATGAAAGAGGTAGCGCCTTATGTCCTGACCGGCGCTCTGGCCGCGCAGGACGATTTGGAAGACGAGCAACTCGATCGCGT
ATCCCGCCATCTAGGAGGTATCGCCACGGTGTATGCGAAGCACGACAAGATTGCCCACACTGTCGCACTGCGGATCTCGG
GCACGCTGGTGCGTGACGACGTGCGCTATATCGAGCAACGCGTGGAGCGGTTTGCCGAGGAAAACGCCCGCGTCGCCGCG
ATTCTCATTAGCGAATGGAATGGTGTGACGAGCGAGCTCGTTGTCGGTATGAACTGGGATGCACAATGTCTGCTCAGGCT
CGGCGCTGCACAGGAACAGCTCGGGAAGCTCACGGAACAGTACTTCGACTTTTTGCTGCGTATCGAACCCCCAAGCTCCC
CTGTCAACGGTAGTCCGCTCGTCCGTGTCGCGATCGAAGCACAAAACGATCGATGTTCGACGGATAGGTTCGCCCCCTAA

Upstream 100 bases:

>100_bases
ATTCTCGAAAAGTTTCGGCCTACTGCGAGCTAGCGTACGGGCCCACCAACATTGGAGCGCCAACTGCAGCGGTATGGAAT
CAAACCAACGGAGGTTCAGC

Downstream 100 bases:

>100_bases
CTCAGTCTCCAGGCGTCGCGCCCCATTCAACGGACTGGTCAAAAAAGGCCATCTTTCATTGAACCGTTACATGTAACGCT
GTATCCTTCGTTACATGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA
ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP

Sequences:

>Translated_159_residues
MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA
ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP
>Mature_159_residues
MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA
ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17691; Mature: 17691

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDD
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEEEECCCHHHHEEEEEECCCHHHHH
VRYIEQRVERFAEENARVAAILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQ
HHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHH
YFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP
HHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDD
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEEEECCCHHHHEEEEEECCCHHHHH
VRYIEQRVERFAEENARVAAILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQ
HHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHH
YFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP
HHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA