| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021870
Identifier: 107021870
GI number: 107021870
Start: 350866
End: 351345
Strand: Reverse
Name: 107021870
Synonym: Bcen_0312
Alternate gene names: NA
Gene position: 351345-350866 (Counterclockwise)
Preceding gene: 107021871
Following gene: 107021869
Centisome position: 10.66
GC content: 58.33
Gene sequence:
>480_bases ATGAAAGAGGTAGCGCCTTATGTCCTGACCGGCGCTCTGGCCGCGCAGGACGATTTGGAAGACGAGCAACTCGATCGCGT ATCCCGCCATCTAGGAGGTATCGCCACGGTGTATGCGAAGCACGACAAGATTGCCCACACTGTCGCACTGCGGATCTCGG GCACGCTGGTGCGTGACGACGTGCGCTATATCGAGCAACGCGTGGAGCGGTTTGCCGAGGAAAACGCCCGCGTCGCCGCG ATTCTCATTAGCGAATGGAATGGTGTGACGAGCGAGCTCGTTGTCGGTATGAACTGGGATGCACAATGTCTGCTCAGGCT CGGCGCTGCACAGGAACAGCTCGGGAAGCTCACGGAACAGTACTTCGACTTTTTGCTGCGTATCGAACCCCCAAGCTCCC CTGTCAACGGTAGTCCGCTCGTCCGTGTCGCGATCGAAGCACAAAACGATCGATGTTCGACGGATAGGTTCGCCCCCTAA
Upstream 100 bases:
>100_bases ATTCTCGAAAAGTTTCGGCCTACTGCGAGCTAGCGTACGGGCCCACCAACATTGGAGCGCCAACTGCAGCGGTATGGAAT CAAACCAACGGAGGTTCAGC
Downstream 100 bases:
>100_bases CTCAGTCTCCAGGCGTCGCGCCCCATTCAACGGACTGGTCAAAAAAGGCCATCTTTCATTGAACCGTTACATGTAACGCT GTATCCTTCGTTACATGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP
Sequences:
>Translated_159_residues MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP >Mature_159_residues MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDDVRYIEQRVERFAEENARVAA ILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQYFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17691; Mature: 17691
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDD CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEEEECCCHHHHEEEEEECCCHHHHH VRYIEQRVERFAEENARVAAILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQ HHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHH YFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP HHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKEVAPYVLTGALAAQDDLEDEQLDRVSRHLGGIATVYAKHDKIAHTVALRISGTLVRDD CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHEEEECCCHHHHEEEEEECCCHHHHH VRYIEQRVERFAEENARVAAILISEWNGVTSELVVGMNWDAQCLLRLGAAQEQLGKLTEQ HHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEECCCCCHHHHHHHCCHHHHHHHHHHH YFDFLLRIEPPSSPVNGSPLVRVAIEAQNDRCSTDRFAP HHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA