| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is cysC [H]
Identifier: 107021861
GI number: 107021861
Start: 343953
End: 344516
Strand: Reverse
Name: cysC [H]
Synonym: Bcen_0303
Alternate gene names: 107021861
Gene position: 344516-343953 (Counterclockwise)
Preceding gene: 107021862
Following gene: 107021853
Centisome position: 10.46
GC content: 61.17
Gene sequence:
>564_bases ATGCTGACGGGTAATCAATCCGTGCTTTCCAGCATGAAGCAGGACCGTGCCTTCGTGGTATGGCTCACCGGTGTCTCCGG TGCCGGTAAATCGACGCTGTCGAATCTACTGAAAGACCAACTCGATGCGCGTGGCCTGCGGACTTTTCTGCTGGACGGCG ACCTGCTTCGCGAAGGATTGAATCAGGACCTGGGATTCAGCGACGCAGACCGCCACGAGAACATTCGCCGGACGGCCGAG GTCGCGCGCCTGATGGTGGAGGCCGGGCTCGTCGTCATCGTTGCGCTGATCTCGCCGTTTCAGGAGGCTCGCGCCAAGGC GCGCGCGCGTTTTCCACAGGGCATGTTTTTCGAAGTCTTTGTCGACGTTGCGCTGGATGTGGCGGAAGCGCGCGACCCCA AGGGGCTGTATGCGCTGGCAAGGCAAGGGGCCATTCGGCAGTTCACCGGCATCGAATCCACGTACGAGAAGCCGGTATTT CCCGACGTGCACGTGCGCACGGGCGAAGCCAGTCCGCTGGAATGCGTGCGCGCGATCATGCAGAAATTGCCGTTGAACGA CTGA
Upstream 100 bases:
>100_bases CAATTCGCCGACGGATGAATCCGCATCATAAAAAAGTACGACGCAGTTCCGGCACATCGACTCCGAGATGACTCAAGATC TCCAAAATTCCCTCCCTGTC
Downstream 100 bases:
>100_bases TACCGGCCCCTCCCGGCTCATCCGCGCTCGACTACCCTCGCGCTATTGGGGCAAGCGACGGTTGAGCTGTCTGCCTTAGG CCACACCGGCCCACTCTCAT
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLTGNQSVLSSMKQDRAFVVWLTGVSGAGKSTLSNLLKDQLDARGLRTFLLDGDLLREGLNQDLGFSDADRHENIRRTAE VARLMVEAGLVVIVALISPFQEARAKARARFPQGMFFEVFVDVALDVAEARDPKGLYALARQGAIRQFTGIESTYEKPVF PDVHVRTGEASPLECVRAIMQKLPLND
Sequences:
>Translated_187_residues MLTGNQSVLSSMKQDRAFVVWLTGVSGAGKSTLSNLLKDQLDARGLRTFLLDGDLLREGLNQDLGFSDADRHENIRRTAE VARLMVEAGLVVIVALISPFQEARAKARARFPQGMFFEVFVDVALDVAEARDPKGLYALARQGAIRQFTGIESTYEKPVF PDVHVRTGEASPLECVRAIMQKLPLND >Mature_187_residues MLTGNQSVLSSMKQDRAFVVWLTGVSGAGKSTLSNLLKDQLDARGLRTFLLDGDLLREGLNQDLGFSDADRHENIRRTAE VARLMVEAGLVVIVALISPFQEARAKARARFPQGMFFEVFVDVALDVAEARDPKGLYALARQGAIRQFTGIESTYEKPVF PDVHVRTGEASPLECVRAIMQKLPLND
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=177, Percent_Identity=49.1525423728814, Blast_Score=167, Evalue=5e-42, Organism=Homo sapiens, GI62912492, Length=173, Percent_Identity=49.1329479768786, Blast_Score=164, Evalue=5e-41, Organism=Homo sapiens, GI34447231, Length=173, Percent_Identity=49.1329479768786, Blast_Score=164, Evalue=6e-41, Organism=Escherichia coli, GI1789107, Length=172, Percent_Identity=53.4883720930233, Blast_Score=179, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17542422, Length=170, Percent_Identity=45.2941176470588, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322852, Length=173, Percent_Identity=46.8208092485549, Blast_Score=164, Evalue=1e-41, Organism=Drosophila melanogaster, GI24667040, Length=170, Percent_Identity=47.6470588235294, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI24667032, Length=170, Percent_Identity=47.6470588235294, Blast_Score=154, Evalue=4e-38, Organism=Drosophila melanogaster, GI24667028, Length=170, Percent_Identity=47.6470588235294, Blast_Score=154, Evalue=4e-38, Organism=Drosophila melanogaster, GI24667036, Length=170, Percent_Identity=47.6470588235294, Blast_Score=154, Evalue=4e-38, Organism=Drosophila melanogaster, GI116007838, Length=170, Percent_Identity=47.6470588235294, Blast_Score=154, Evalue=5e-38, Organism=Drosophila melanogaster, GI24667044, Length=170, Percent_Identity=47.6470588235294, Blast_Score=154, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 20619; Mature: 20619
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGNQSVLSSMKQDRAFVVWLTGVSGAGKSTLSNLLKDQLDARGLRTFLLDGDLLREGL CCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC NQDLGFSDADRHENIRRTAEVARLMVEAGLVVIVALISPFQEARAKARARFPQGMFFEVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH VDVALDVAEARDPKGLYALARQGAIRQFTGIESTYEKPVFPDVHVRTGEASPLECVRAIM HHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCEEECCCCCHHHHHHHHH QKLPLND HHCCCCC >Mature Secondary Structure MLTGNQSVLSSMKQDRAFVVWLTGVSGAGKSTLSNLLKDQLDARGLRTFLLDGDLLREGL CCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC NQDLGFSDADRHENIRRTAEVARLMVEAGLVVIVALISPFQEARAKARARFPQGMFFEVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH VDVALDVAEARDPKGLYALARQGAIRQFTGIESTYEKPVFPDVHVRTGEASPLECVRAIM HHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCEEECCCCCHHHHHHHHH QKLPLND HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA