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The map label for this gene is yobV [H]

Identifier: 107021781

GI number: 107021781

Start: 235754

End: 236440

Strand: Reverse

Name: yobV [H]

Synonym: Bcen_0221

Alternate gene names: 107021781

Gene position: 236440-235754 (Counterclockwise)

Preceding gene: 107021782

Following gene: 107021779

Centisome position: 7.18

GC content: 70.16

Gene sequence:

>687_bases
ATGACCCGCCGTGCCGACCGCCTGTTCCAGATCGCCGAGCTGTTGCGCGGGCGTCGTCTCACGACCGCGCAGCAGCTGGC
CGACTGGCTGTCGGTGTCGCCGCGCACGGTCTATCGCGACGTGCGCGACCTGCAACTGTCAGGGGTGCCGATCGAAGGCG
AAGCCGGCATCGGCTACCGGCTGAACCGCAACGCGAGCCTGCCGCCGCTCACGTTCACGGCCGAGGAGCTGGCGGCGCTC
GCCACCGGCGCGCGCATGCTCGAGACCTGGGGCGGCGCGCGCTTCGCGAGCGGTGCGCGCTCGGCGCTCGCGAAGATCGC
GTCGGCGATGCCGGCCGACAAGCGCACGGCGCTCGATCGGCTACCCGTGTTCGCGCCGTCGTTCCACATCGACGAGACGT
TTTGCGCGAAGGTCGACGCGATCCACCAGGCGATCGACACGCGCCACATCGTCAGCTTCGACTACCGCGACCGGCTCGGC
GCGCATTCGCAGCGCCGCGTGTGGCCACTCGGGCTCGTCTACTGGGGCGGGCGCTGGACGATCGGCGCGTGGTGCGAGCT
GCGCGGCGATTTCCGTACCTTCGACATCGCGCGGATGGGCGACATCACCGTGCACGAGCAGTTTCCGGACATGGAAGGCC
GGCGGATCGCCGACTACATGCGGATTGCGGAAGCGCCGATGCGCTGA

Upstream 100 bases:

>100_bases
GGCCTGCACGCGCCGAAATGCCACTGAGCGCAGCGGTCAGCGGGCCGGCGCGGCGCTATCATCGCGAAGTCCCCGTCGCC
AGAGGAATCGAGGTGCTGTC

Downstream 100 bases:

>100_bases
CGCGCTGACGTGGCAAGGCGGCGGGCACGCACCGCCGCCCTTCGTTTTCCGGGCGCCATGTGGCGCCCGGCCCCACTTCG
TCACCCGCCGAACACCACCG

Product: helix-turn-helix, type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRNASLPPLTFTAEELAAL
ATGARMLETWGGARFASGARSALAKIASAMPADKRTALDRLPVFAPSFHIDETFCAKVDAIHQAIDTRHIVSFDYRDRLG
AHSQRRVWPLGLVYWGGRWTIGAWCELRGDFRTFDIARMGDITVHEQFPDMEGRRIADYMRIAEAPMR

Sequences:

>Translated_228_residues
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRNASLPPLTFTAEELAAL
ATGARMLETWGGARFASGARSALAKIASAMPADKRTALDRLPVFAPSFHIDETFCAKVDAIHQAIDTRHIVSFDYRDRLG
AHSQRRVWPLGLVYWGGRWTIGAWCELRGDFRTFDIARMGDITVHEQFPDMEGRRIADYMRIAEAPMR
>Mature_227_residues
TRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRNASLPPLTFTAEELAALA
TGARMLETWGGARFASGARSALAKIASAMPADKRTALDRLPVFAPSFHIDETFCAKVDAIHQAIDTRHIVSFDYRDRLGA
HSQRRVWPLGLVYWGGRWTIGAWCELRGDFRTFDIARMGDITVHEQFPDMEGRRIADYMRIAEAPMR

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 25733; Mature: 25602

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYR
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEE
LNRNASLPPLTFTAEELAALATGARMLETWGGARFASGARSALAKIASAMPADKRTALDR
ECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
LPVFAPSFHIDETFCAKVDAIHQAIDTRHIVSFDYRDRLGAHSQRRVWPLGLVYWGGRWT
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEECHHHHHCCCCCCCEEEEEEEEECCEEE
IGAWCELRGDFRTFDIARMGDITVHEQFPDMEGRRIADYMRIAEAPMR
EEEEEEECCCCEEEEEHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYR
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEE
LNRNASLPPLTFTAEELAALATGARMLETWGGARFASGARSALAKIASAMPADKRTALDR
ECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
LPVFAPSFHIDETFCAKVDAIHQAIDTRHIVSFDYRDRLGAHSQRRVWPLGLVYWGGRWT
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEECHHHHHCCCCCCCEEEEEEEEECCEEE
IGAWCELRGDFRTFDIARMGDITVHEQFPDMEGRRIADYMRIAEAPMR
EEEEEEECCCCEEEEEHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]