| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021763
Identifier: 107021763
GI number: 107021763
Start: 215537
End: 216673
Strand: Reverse
Name: 107021763
Synonym: Bcen_0203
Alternate gene names: NA
Gene position: 216673-215537 (Counterclockwise)
Preceding gene: 107021764
Following gene: 107021759
Centisome position: 6.58
GC content: 68.51
Gene sequence:
>1137_bases ATGCCCGCGATGCCACGCCTGCCGATCCGTTTCGCCCTTGCCGCCAGCCTGTCCACCGTCGTCGCCCTCGCCGCGTGCGG AGGCGATGATGTCACCGCCGTTGCGCGCACGGACGCGCAACCGCCGTCCGGCGGCACGACGACGACGCCGGCCCCGACGC CGCCCGCCACCACCCCGCCGCAACCGGGCAAGTGGAAAGCCGCGCGCGCCGGCGACCTGATCGACGTGACGCTCGGCGAT CTCCATCCGACGCAGGGTGCGATCGGCTACGACCAGATCTACTACAAGCTCGGACGCTACGAACTGCAGCCCGACAAGAA GTTCGACGACTTCTGCGCGGACGAAGGCCTCGGCGGCGTCGCATCGAGCGGCTACACGGCCCGATCGTCGCTGCGCGAAC CGGCCAGCTACACGTGCGCGACGACCGACGCGAACGCCCGCGACCGCTCGGTGCTGAACCCCGTCGTGATCGGCCCGAAC GGCGATGCGCTGTACCTGACCGACGGCCACCACGGCCTGTCGACCTACTACGAGACGCCCGACGGCGGGCCGGCGCTGCA TGTGCACGTCGTCGTCAAGGACAACCTCAGCGACTATTCGGGCGACGCGTTCTGGCAGCAGATGCAAAGCCGCGGCTACC TGCGCCTGAAGAACGGCGAAGGCCAGCCGATCACGACCGCGCAACTGCCGAGCGGCCTCGGCCTGAAACTCGGGATGACG AACGACCGCTACCGCTCGCTCGTCTATTTCACGCGCGACATCGGCTACAGCAAGCCCGCACAAGCGACCGACTACCTCGA GTTCTACTGGGCCGACTGGCTGCGCGCGCAGCCCTGCACGTTCGCGCTGGCGAACTACGACCTCACGCGCGGCGGCACGA CCGATCCCGACCCGGCGAAGGCCGACACGGGCTACCTGAATGCGGTCTGGAATGCGTCGACGCGGATGGTCGCGGCCACC GACCCCGTGATCGACGGCAAGACGGGCGCCGACCTCGGGCGCGCCGATGCGATCAACGGCGGGAAGAAATACAACAAGGG GGAATTCGACAAGCTGCGCCAGCCGATCACGGCCGACAAGCCCGGCAAGATCGCGTACGCGCTCGACTACAAGACGCGCC ACGCGCTGCCGCAATAA
Upstream 100 bases:
>100_bases GACAAGCTGACGGGCTCGCACCCGCGCACGATCGCACGCCTTGCCCGTCACGCCCGCCCGTGGCCCGCGCGGAGTCCCGC CCACCCGCTACCGACACCCG
Downstream 100 bases:
>100_bases GCGTCACGCCAGAAGGAAGCAACCCCGGCCCGGCCATGCCATGCCGGACGGGGTTCGCATGCTCAAAGCACCTTGCGGTA CCCGTCGTCATCGTCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: ParB-Like Nuclease Family Protein; ParB-Like Nuclease
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MPAMPRLPIRFALAASLSTVVALAACGGDDVTAVARTDAQPPSGGTTTTPAPTPPATTPPQPGKWKAARAGDLIDVTLGD LHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLGGVASSGYTARSSLREPASYTCATTDANARDRSVLNPVVIGPN GDALYLTDGHHGLSTYYETPDGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGQPITTAQLPSGLGLKLGMT NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPCTFALANYDLTRGGTTDPDPAKADTGYLNAVWNASTRMVAAT DPVIDGKTGADLGRADAINGGKKYNKGEFDKLRQPITADKPGKIAYALDYKTRHALPQ
Sequences:
>Translated_378_residues MPAMPRLPIRFALAASLSTVVALAACGGDDVTAVARTDAQPPSGGTTTTPAPTPPATTPPQPGKWKAARAGDLIDVTLGD LHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLGGVASSGYTARSSLREPASYTCATTDANARDRSVLNPVVIGPN GDALYLTDGHHGLSTYYETPDGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGQPITTAQLPSGLGLKLGMT NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPCTFALANYDLTRGGTTDPDPAKADTGYLNAVWNASTRMVAAT DPVIDGKTGADLGRADAINGGKKYNKGEFDKLRQPITADKPGKIAYALDYKTRHALPQ >Mature_377_residues PAMPRLPIRFALAASLSTVVALAACGGDDVTAVARTDAQPPSGGTTTTPAPTPPATTPPQPGKWKAARAGDLIDVTLGDL HPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLGGVASSGYTARSSLREPASYTCATTDANARDRSVLNPVVIGPNG DALYLTDGHHGLSTYYETPDGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGQPITTAQLPSGLGLKLGMTN DRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPCTFALANYDLTRGGTTDPDPAKADTGYLNAVWNASTRMVAATD PVIDGKTGADLGRADAINGGKKYNKGEFDKLRQPITADKPGKIAYALDYKTRHALPQ
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40578; Mature: 40446
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAMPRLPIRFALAASLSTVVALAACGGDDVTAVARTDAQPPSGGTTTTPAPTPPATTPP CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC QPGKWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLGGV CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHCCCCCC ASSGYTARSSLREPASYTCATTDANARDRSVLNPVVIGPNGDALYLTDGHHGLSTYYETP CCCCCHHHHHHCCCCCEEEECCCCCCCCHHCCCCEEECCCCCEEEEECCCCCCCCEEECC DGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGQPITTAQLPSGLGLKLGMT CCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEHHCCCCCCCEEECCC NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPCTFALANYDLTRGGTTDPDPAK CHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCC ADTGYLNAVWNASTRMVAATDPVIDGKTGADLGRADAINGGKKYNKGEFDKLRQPITADK CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC PGKIAYALDYKTRHALPQ CCCEEEEEECHHHCCCCC >Mature Secondary Structure PAMPRLPIRFALAASLSTVVALAACGGDDVTAVARTDAQPPSGGTTTTPAPTPPATTPP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC QPGKWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLGGV CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHCCCCCC ASSGYTARSSLREPASYTCATTDANARDRSVLNPVVIGPNGDALYLTDGHHGLSTYYETP CCCCCHHHHHHCCCCCEEEECCCCCCCCHHCCCCEEECCCCCEEEEECCCCCCCCEEECC DGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGQPITTAQLPSGLGLKLGMT CCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEHHCCCCCCCEEECCC NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPCTFALANYDLTRGGTTDPDPAK CHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCC ADTGYLNAVWNASTRMVAATDPVIDGKTGADLGRADAINGGKKYNKGEFDKLRQPITADK CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC PGKIAYALDYKTRHALPQ CCCEEEEEECHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA