| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is pgpA [H]
Identifier: 107021706
GI number: 107021706
Start: 151697
End: 152233
Strand: Reverse
Name: pgpA [H]
Synonym: Bcen_0146
Alternate gene names: 107021706
Gene position: 152233-151697 (Counterclockwise)
Preceding gene: 107021707
Following gene: 107021705
Centisome position: 4.62
GC content: 69.65
Gene sequence:
>537_bases ATGCAGACTGATCCGACGCCCGCGCACGCCGCGGCCGAGCCCGGCGCCGCGCCGACCCGCGTGACGGCCCGCTTCATGCT GTCGCACCCCGCGCATCTCGTGTCGCTCGGCTTCGGCAGCGGGCTCGCGCCGATCATGCCCGGCACGTTCGGCTCGCTGT TCGGCTGGCTCACGTTCGTCGTGCTCAACCGCTACCTGACGGTGCCCGAATGGTGGGCGCTGATCGCCGTCGGCTTCGCG GCCGGCACGTGGGTCACCGGTTTCACCGCGAAGAAGGCCGGCGTGGCCGATCCGGGCGCCGTCGTCTGGGACGAGATCGT CGCGATCTGGCTCGTGATGCTGTTCGTCACGCCCGCGACCTTCGTCGGCCAGTTGTGGGCGTTCGTCGCGTTCCGCTTCT TCGACATGCTCAAGCCGCCGCCGATCCGCTACTTCGACCGCCGCCTGAAAGGCGCGCTCGGCATCATGGTCGACGATCTG GTCGCCGCGTTCATGACGCTGCTCGTGATCGCGCTGTGGCGCTCCGTCGTCGGCTGA
Upstream 100 bases:
>100_bases ATACGCGCGTTGTCCGCGCCGTCGGCGCACCCCGCCATCGCGTGGCGCGACGCCGCCGGCGCGCCCCTCGCTCTCACGTT GCACGGCTTCGACCACTTCC
Downstream 100 bases:
>100_bases CCGATTTCCCGACTCCCGTTTCCCGACTCCCGTTTCCCGACGCGCATGCCAACCGATTCCGTCGTCCACCAGCTTGCGAT CCGCGCAGGCAACAAGCTGC
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MQTDPTPAHAAAEPGAAPTRVTARFMLSHPAHLVSLGFGSGLAPIMPGTFGSLFGWLTFVVLNRYLTVPEWWALIAVGFA AGTWVTGFTAKKAGVADPGAVVWDEIVAIWLVMLFVTPATFVGQLWAFVAFRFFDMLKPPPIRYFDRRLKGALGIMVDDL VAAFMTLLVIALWRSVVG
Sequences:
>Translated_178_residues MQTDPTPAHAAAEPGAAPTRVTARFMLSHPAHLVSLGFGSGLAPIMPGTFGSLFGWLTFVVLNRYLTVPEWWALIAVGFA AGTWVTGFTAKKAGVADPGAVVWDEIVAIWLVMLFVTPATFVGQLWAFVAFRFFDMLKPPPIRYFDRRLKGALGIMVDDL VAAFMTLLVIALWRSVVG >Mature_178_residues MQTDPTPAHAAAEPGAAPTRVTARFMLSHPAHLVSLGFGSGLAPIMPGTFGSLFGWLTFVVLNRYLTVPEWWALIAVGFA AGTWVTGFTAKKAGVADPGAVVWDEIVAIWLVMLFVTPATFVGQLWAFVAFRFFDMLKPPPIRYFDRRLKGALGIMVDDL VAAFMTLLVIALWRSVVG
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=145, Percent_Identity=40, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 19324; Mature: 19324
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDPTPAHAAAEPGAAPTRVTARFMLSHPAHLVSLGFGSGLAPIMPGTFGSLFGWLTFV CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VLNRYLTVPEWWALIAVGFAAGTWVTGFTAKKAGVADPGAVVWDEIVAIWLVMLFVTPAT HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FVGQLWAFVAFRFFDMLKPPPIRYFDRRLKGALGIMVDDLVAAFMTLLVIALWRSVVG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTDPTPAHAAAEPGAAPTRVTARFMLSHPAHLVSLGFGSGLAPIMPGTFGSLFGWLTFV CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VLNRYLTVPEWWALIAVGFAAGTWVTGFTAKKAGVADPGAVVWDEIVAIWLVMLFVTPAT HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FVGQLWAFVAFRFFDMLKPPPIRYFDRRLKGALGIMVDDLVAAFMTLLVIALWRSVVG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]