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The map label for this gene is pcp [H]

Identifier: 107021676

GI number: 107021676

Start: 122059

End: 122532

Strand: Reverse

Name: pcp [H]

Synonym: Bcen_0116

Alternate gene names: 107021676

Gene position: 122532-122059 (Counterclockwise)

Preceding gene: 107021677

Following gene: 107021668

Centisome position: 3.72

GC content: 70.89

Gene sequence:

>474_bases
ATGTTGACGAAAAAAACCCTCACGCTCGCGGCCATGCTGACGGCCACGCTGACCCTCGCCGGCTGCTTCACGGCACCCGG
TTCGGCGGATGTCTATAGCGTCGGCCAGGCGCAGCGCGAACAGACGGTCCGCATGGGCACGGTCGAAAGCGTGCGTGCGG
TGCGCATCCAGTCCGACGGCGGCGGCAGCGCGATCGGCACGCTCGGCGGCGGCGCACTCGGCGCGGTCGCGGGCAGCGCG
ATCGGCGGCGGCAAAGGCTCGATCCTGACGGCGATTGCCGGCGGCCTCGTCGGTGCGGTCGCGGGTAACGCGGTCGGCGA
AAACCTCAGCACGGCGAACGGTGTCGAAATCACCGTGCGCCTCGACAACGGCGATCTGCGCTCGATCACGCAGGCGGCCA
GCGGCGAAGCGTTCCGCGCCGGCGAGCGGGTGCGCCTGCTGTCGAGCGGCGGCGTCACGCGCGTCACGCACTAA

Upstream 100 bases:

>100_bases
CAAGGGCCCCAGACTTACGTACTGACGCGCGCCGAAATCGACGCACGCTTCGAGACTGCATTCGGTTACAGTCTCAAATG
AATATTGTGGGAGAGCAAAG

Downstream 100 bases:

>100_bases
CCGATATCCTCAGCACGCGGCGCAAGCCGCGGTCGAACGCATGTGCGAAGCCGCACATGCGTTTTTTTTCGTCCACGCTC
GGGTCGGCGAGCTGATCGGC

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: 15 kDa lipoprotein; PAL cross-reacting lipoprotein [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLTKKTLTLAAMLTATLTLAGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDGGGSAIGTLGGGALGAVAGSA
IGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVRLDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH

Sequences:

>Translated_157_residues
MLTKKTLTLAAMLTATLTLAGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDGGGSAIGTLGGGALGAVAGSA
IGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVRLDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH
>Mature_157_residues
MLTKKTLTLAAMLTATLTLAGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDGGGSAIGTLGGGALGAVAGSA
IGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVRLDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=135, Percent_Identity=37.7777777777778, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15357; Mature: 15357

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKKTLTLAAMLTATLTLAGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCC
GGSAIGTLGGGALGAVAGSAIGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVR
CCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
LDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH
ECCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEECCC
>Mature Secondary Structure
MLTKKTLTLAAMLTATLTLAGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCC
GGSAIGTLGGGALGAVAGSAIGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVR
CCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
LDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH
ECCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 7542800 [H]