| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021619
Identifier: 107021619
GI number: 107021619
Start: 53105
End: 53371
Strand: Reverse
Name: 107021619
Synonym: Bcen_0058
Alternate gene names: NA
Gene position: 53371-53105 (Counterclockwise)
Preceding gene: 107021620
Following gene: 107021614
Centisome position: 1.62
GC content: 61.42
Gene sequence:
>267_bases GTGGCTTCGAGTCAACGATATCCACAAGGCATTCGACGTCCGGACGTCGCCACCGATTCGTTCGCTGCCCTCTTTCATGG TCGGCAAAGCCTTGCCGGGCAACGCATTCAGGCCGACGAGCCCATCGAAACCGGGACGCTCACCGCTCGCATGCACAGGG TTTCAACTGGATCGTGCGCCGGTTATCCACACACCGCCGCTTACGCTTCGGGTCACTTCGTCCCGACTCTCCCGAGAATC TCGCCGGTTTCCGGCGCGATGACGTAG
Upstream 100 bases:
>100_bases TTCTCGTTGTTTTGGGCATCGATATCCACAACCCGGGTGATTGACCGATCGTCTTCGCCGGGTTCGACTACGCTCACCCG TTGAATGCACCGGATTTCGA
Downstream 100 bases:
>100_bases TGGATCGACTTCCCGAGTCGGTTCGCGTTGCCCAGTCCGCGCATGCCCGGAATCAGCTTTGCCACGAACGTGATGGTGAC GACATCATCATCCGGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCAGYPHTAAYASGHFVPTLPRI SPVSGAMT
Sequences:
>Translated_88_residues MASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCAGYPHTAAYASGHFVPTLPRI SPVSGAMT >Mature_87_residues ASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCAGYPHTAAYASGHFVPTLPRIS PVSGAMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9372; Mature: 9240
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCA CCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCCEEEHHEECCCCCCC GYPHTAAYASGHFVPTLPRISPVSGAMT CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCA CCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCCEEEHHEECCCCCCC GYPHTAAYASGHFVPTLPRISPVSGAMT CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA