| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021614
Identifier: 107021614
GI number: 107021614
Start: 50254
End: 50769
Strand: Reverse
Name: 107021614
Synonym: Bcen_0052
Alternate gene names: NA
Gene position: 50769-50254 (Counterclockwise)
Preceding gene: 107021619
Following gene: 107021611
Centisome position: 1.54
GC content: 65.89
Gene sequence:
>516_bases ATGTCCGAGGTCACGACCGCCGCATCGTCCGCGAGCAACGACGAAATCGCCGCTTACGTCGGCAAGAACGCCGCCTGGTT CGAACGAAAATGGGCGATCGCCGACTCGCGCAAGAGCCGGCAGTCGTGGAACTGGGCCGCGTGCTTTCTCGGCCCGGTCT GGTTGGCGTATCGATGCATGTACTGGCAGGCGGCCGCCGTGCTCGCCGTCACGCTCGGCATCACGCTGATCGAATTGCTG TACTTCCCGGGATACTTCGAATCGAGCGTGCTCGACCCGGCCACGATCGCGATCGCGGTGTCGCTCGGCTGGTACGGGAA CGGCCTCTACAAGCGGCACGTCGAGCGCCAGATCGGAAAACTGCGCCCGAACGCGACGTCCCGCGAATCGTTTCTCGCGC TGCTCGAGGCGCAAGGCGGCACGAACTGGCTGGCGGCGGCCGGTTTCGCCGTCGCGACGCCGCTGCTCGGCGTCCTGCTG TTCATGATGGGCAACGCCGGAGGCGCGATGTACTGA
Upstream 100 bases:
>100_bases TAGAATCGTCTGCGCATCGACGTGGCCGCTTCGCCCGTCGCCCAATTTCCATCGCATCAGAACAACGACGCGCGATCCGC GCGACTGAGAGCACACGATC
Downstream 100 bases:
>100_bases TCGCGGTAGCCGGCGATCGGCAAACGCAGGGCAGAAAGAAGAGAGCGGACGGCGCCATGCATTCATATCGCACGTCGCAC CCGGCGCATGCTCGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSEVTTAASSASNDEIAAYVGKNAAWFERKWAIADSRKSRQSWNWAACFLGPVWLAYRCMYWQAAAVLAVTLGITLIELL YFPGYFESSVLDPATIAIAVSLGWYGNGLYKRHVERQIGKLRPNATSRESFLALLEAQGGTNWLAAAGFAVATPLLGVLL FMMGNAGGAMY
Sequences:
>Translated_171_residues MSEVTTAASSASNDEIAAYVGKNAAWFERKWAIADSRKSRQSWNWAACFLGPVWLAYRCMYWQAAAVLAVTLGITLIELL YFPGYFESSVLDPATIAIAVSLGWYGNGLYKRHVERQIGKLRPNATSRESFLALLEAQGGTNWLAAAGFAVATPLLGVLL FMMGNAGGAMY >Mature_170_residues SEVTTAASSASNDEIAAYVGKNAAWFERKWAIADSRKSRQSWNWAACFLGPVWLAYRCMYWQAAAVLAVTLGITLIELLY FPGYFESSVLDPATIAIAVSLGWYGNGLYKRHVERQIGKLRPNATSRESFLALLEAQGGTNWLAAAGFAVATPLLGVLLF MMGNAGGAMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18613; Mature: 18481
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVTTAASSASNDEIAAYVGKNAAWFERKWAIADSRKSRQSWNWAACFLGPVWLAYRCM CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH YWQAAAVLAVTLGITLIELLYFPGYFESSVLDPATIAIAVSLGWYGNGLYKRHVERQIGK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHH LRPNATSRESFLALLEAQGGTNWLAAAGFAVATPLLGVLLFMMGNAGGAMY CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEVTTAASSASNDEIAAYVGKNAAWFERKWAIADSRKSRQSWNWAACFLGPVWLAYRCM CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH YWQAAAVLAVTLGITLIELLYFPGYFESSVLDPATIAIAVSLGWYGNGLYKRHVERQIGK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHH LRPNATSRESFLALLEAQGGTNWLAAAGFAVATPLLGVLLFMMGNAGGAMY CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA