| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021608
Identifier: 107021608
GI number: 107021608
Start: 45394
End: 45696
Strand: Reverse
Name: 107021608
Synonym: Bcen_0046
Alternate gene names: NA
Gene position: 45696-45394 (Counterclockwise)
Preceding gene: 107021609
Following gene: 107021607
Centisome position: 1.39
GC content: 70.96
Gene sequence:
>303_bases ATGAGCAAGAAACTTATTCTCGGTGCAGTTCTCGGTGTAGCGGCGCTGGCAGCCTCGGGCGTCGCGTCGGCCCACGTCGA CCTGTCGGTCGGCATCGGCGTGCCGGGCGTCTACACGGCGCCGGCGCCCGTCTACGTCGCGCCGCCTCCGCCGGTGATGT ACGCGCCGGTCGGCTATCGCGATGACGACTGGCGTGCACGTCAGTGGCGTGAACACGAGTGGCGCCGCCGTGAATGGCGC GAGCACGAGTGGCGCGAGCGCGCCTGGCGTGACGGCGGCGGCTGGCGCGGCCGTTGGGACTGA
Upstream 100 bases:
>100_bases CGTTACCTGTCTCGCATACCCGTTTCACCTGTGTCAGCGTCCGGTGCCTAGACTCCGAACCGTAGTCACATGACGCACGA CACGTGCAGGGAGTCGCGAA
Downstream 100 bases:
>100_bases GCGCGATCGCTCGCGAGCGCACTGACCACGACGACCTGAGGAGAGTGATCACATGAATCCCATCCGGCACATCGGACGGT ATGCCGCCGCCGCAGTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSKKLILGAVLGVAALAASGVASAHVDLSVGIGVPGVYTAPAPVYVAPPPPVMYAPVGYRDDDWRARQWREHEWRRREWR EHEWRERAWRDGGGWRGRWD
Sequences:
>Translated_100_residues MSKKLILGAVLGVAALAASGVASAHVDLSVGIGVPGVYTAPAPVYVAPPPPVMYAPVGYRDDDWRARQWREHEWRRREWR EHEWRERAWRDGGGWRGRWD >Mature_99_residues SKKLILGAVLGVAALAASGVASAHVDLSVGIGVPGVYTAPAPVYVAPPPPVMYAPVGYRDDDWRARQWREHEWRRREWRE HEWRERAWRDGGGWRGRWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11375; Mature: 11244
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLILGAVLGVAALAASGVASAHVDLSVGIGVPGVYTAPAPVYVAPPPPVMYAPVGYR CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCEEECCCCCEEECCCCCC DDDWRARQWREHEWRRREWREHEWRERAWRDGGGWRGRWD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SKKLILGAVLGVAALAASGVASAHVDLSVGIGVPGVYTAPAPVYVAPPPPVMYAPVGYR CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCEEECCCCCEEECCCCCC DDDWRARQWREHEWRRREWREHEWRERAWRDGGGWRGRWD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA