| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488638
Identifier: 103488638
GI number: 103488638
Start: 3312867
End: 3313274
Strand: Reverse
Name: 103488638
Synonym: Sala_3163
Alternate gene names: NA
Gene position: 3313274-3312867 (Counterclockwise)
Preceding gene: 103488639
Following gene: 103488637
Centisome position: 99.05
GC content: 60.78
Gene sequence:
>408_bases ATGACGAGAATGATTTTCATAAACCTGCCGGTCAGCGACCTTGCAAAGTCGCAGGCCTTTTACGAAGCGCTGGGCTTTGC CAACAATCCGCAGTTCAGCGACGAAGGCAGCGCATGCATGGTGGTGTCGGAGACGATTCACGTCATGCTGCTGACGCACG CCAAGTGGCAGGGTTTTACCGATCGCCCGATCCCGCCCGCGACCATGAGCGAGGTTCTGCTCGCCCTGTCGTGCGACAGC CGCGACGCGGTCGACGCGATGAATGCGGCGGCGGCCGCGCATGGCGGCACCGCCGACATCAACCCGGTGCAGGATCTGGG TTTTATGTACAACCGCAACCTCGCCGACCCCGACGGTCATGTGTGGGAAGCGATGTTCATGGATATGGAAGCCGTGTCGG CCGAATGA
Upstream 100 bases:
>100_bases CTTACCAAAGGTCAATTCGCCGTGCGCCATGCCCGCCTAATCATCCTGTCCGGACGATCACCGTGACGGTCACGGCGGCC CGAGACAAAGGACAAGACCG
Downstream 100 bases:
>100_bases GGCCGGTTCACCCAAGCGAATGATAGGGTCCACCCGATGGCTGCGTCAAAACAAGCGGGCAAGTTCGATGCCTATGCCGA AACACTCCCCGAATTTGCGA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Glyoxalase; Glyoxalase/Bleomycin Resistance; Lactoylglutathione Lyase-Like Protein; Glyoxalase/Bleomycin Resistance Protein/ Dioxygenase
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTRMIFINLPVSDLAKSQAFYEALGFANNPQFSDEGSACMVVSETIHVMLLTHAKWQGFTDRPIPPATMSEVLLALSCDS RDAVDAMNAAAAAHGGTADINPVQDLGFMYNRNLADPDGHVWEAMFMDMEAVSAE
Sequences:
>Translated_135_residues MTRMIFINLPVSDLAKSQAFYEALGFANNPQFSDEGSACMVVSETIHVMLLTHAKWQGFTDRPIPPATMSEVLLALSCDS RDAVDAMNAAAAAHGGTADINPVQDLGFMYNRNLADPDGHVWEAMFMDMEAVSAE >Mature_134_residues TRMIFINLPVSDLAKSQAFYEALGFANNPQFSDEGSACMVVSETIHVMLLTHAKWQGFTDRPIPPATMSEVLLALSCDSR DAVDAMNAAAAAHGGTADINPVQDLGFMYNRNLADPDGHVWEAMFMDMEAVSAE
Specific function: Unknown
COG id: COG3607
COG function: function code R; Predicted lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14657; Mature: 14526
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMIFINLPVSDLAKSQAFYEALGFANNPQFSDEGSACMVVSETIHVMLLTHAKWQGFT CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCC DRPIPPATMSEVLLALSCDSRDAVDAMNAAAAAHGGTADINPVQDLGFMYNRNLADPDGH CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCH VWEAMFMDMEAVSAE HHHHHHHHHHHHCCC >Mature Secondary Structure TRMIFINLPVSDLAKSQAFYEALGFANNPQFSDEGSACMVVSETIHVMLLTHAKWQGFT CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCC DRPIPPATMSEVLLALSCDSRDAVDAMNAAAAAHGGTADINPVQDLGFMYNRNLADPDGH CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCH VWEAMFMDMEAVSAE HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA