The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488597

Identifier: 103488597

GI number: 103488597

Start: 3272042

End: 3274363

Strand: Direct

Name: 103488597

Synonym: Sala_3122

Alternate gene names: NA

Gene position: 3272042-3274363 (Clockwise)

Preceding gene: 103488595

Following gene: 103488600

Centisome position: 97.81

GC content: 67.23

Gene sequence:

>2322_bases
ATGCCTGGGTCGACATGTGGGTCACCCACGTTTCGGTTGCTGGGGGATTTTGCGGTTGAACCGGCGCTGCTCGCGCCGCA
TGGCCGCAAGGCCAGAGCGCTTCTGGCGCGACTCGCTCTGGCCGACGGCCCGCTTTCGCGCGACCGGCTCAGCGCGCTCC
TGTGGAGCCATCGGGCCGAGCCCCAGGCGCACGCCAGTCTGCGGCAATGCCTGATGGAACTGAAAGCCTGGACGCGTGCC
TCGCCGCCGCTGCTCCATGCCGACCGCGACGCGATCGCGATCGATCATGCGCATGTCGCTGACGATGTCTCCCTGCTGCT
TTCGGCCTGTGCATGCGACGATGCCGACGCGGTGCTGCGCTGGCTGCCCGCTGACGAGGTTGCGCTGCTCGCCGATCTCG
ACGGGGTCGACGAAGCCTTTGACGACTGGCTGGCCGCCGAACGGGCGCGCAACACCGAGGTGGTCGTCCGCGAGGTGCTG
GCCATGGCCGAACGACTGCTGGTCGCCGGCGATATCGACGGATCGCTGCGCGTTGCCGACCGGATGACCCGATTCGATCC
GTGCAGCGAACATGCCGCTCGTCTGGTCATGCAGGCGCGCTGGCAGGCGGGGGACGATGATGGCGTGCGCCACGCATGGC
ACCGGCTCGAGGATGCGGTCGCGCGGGGGCTCGACGGGCGACCATCGCCGGAAACCGCCAGACTGTATCATCGGTTGATG
GACGAACCTTCATGCCGGTCGAACGAGGTGGCGCTCCAGACGGGCAAAAAACCGCCGCCCGACCGGCGGACGCATCGCAT
TGCGACCGTTGCGGCAACCGTTGCGGCGTTCGGCCTGATGAGCGCTGATGCGCCGCGTGAGGGAGGCGGGGAGCCCGCGA
TGATGACGCCGACAGTACGGATCGAACCGGTCGTTTCGCGCAACCATGGCATGATTGAACTTGGTTTCGCCGATGCGCTT
GCAGGCGATTTTGTCCGGCTGGCCAACGCGTCAGGCGGCCTCGTCCGCATTCTCGATGGAGAGGCCGTCGGCAGAGGCGA
CTTCATCGTTCGTGTCGCGATCAATCGCGATGACGGCAATTTGACAAGCGAATCGCGCGTCGTCGATGCGCGGAGCGGCG
CGATTCTCTGGTCCAGTCGGCTTTCGGGGTCACCGCGCGACCTGACGCGCCTGCGCGAACAGACGGCGGTGTCGGTGGCT
GCGGTGATTGATTGCGCGCTGCGTCTCAACGACGGACAGGCGGCGCTTGCCGCCGATGCCGACCGGCGCGCGCAAGTGTT
CGCGATCTGCGACGCTCATGACGATCAAGACGGCGCACGCGCCGTCGCCCTGCTCGAACGGTTTGCAGCGCGTTGGCCCG
GCGACAGGGTCGCCCTCGGCCAGCTAGCGCTGGCCCGCGCAAAGCTCATATTCGGCGAGGCCGAAACGGCCGAGCAGGAA
CGCCAGCGCCAGCTCGCGATTCGCGCCGCGCGCCGCGCGCTGGCGAACGACCCCGCCAATGTCTATGCAATGGTGGCGCT
TTCGCAGGCCGGGCGACGCGAACGCTACATGGTCGACGGCCTTCCCATGCTGAAGCGCGCGTTGTCCGTCGATCCGCGAT
TTTCGACCGCATTGATGCTCCAGGCGACAGGACTGTTTCAGGCCGGCTATGTCGCGGCCAGCGTCCGGCCGTCGATTGAC
GCCGCCAACGCCGATCCCACCTCGATCGTCAGGGCGCTTGCGGTCGTTCGGCGGCTGGCCGCGGCGGGGCGGATGAAAGA
AGCCTGGGACCGGCTCGACGCGGTCGCCGCCGTCTGGCCGGACCATCCCGATCTCGTCGAGCATCGCTATCGACTGACGC
TCGAACAGCCTGATAGGGTCCGCGCCGCGGCGCTTGTCGCGTCGAGCGGCGTCGATGACCGATGGCGGCTCGATCGTCTC
ATCCTCCAACAGGTCGCAACCGGACGGCAGGACAGCGCCGCACTCGATGCCGCGGCCGAGATTGAATATTCGCGATTGCC
GGCCGCCGCTTATCAACTCGCCGCGCTCTACACGCGGATCGGCGACATCCGGCGGGCGCTGATCTGGCTCGACCGGGCGC
CGGTTCGCCAAACCAGCGGTCAATGGTCGTTACTCTATTGGCCATCGGTGGCGCCGCTCCGCCGCGAACCGCGCTTTTTC
GCCAAGATGGCGCAGCTTGGGCTTGTCGATTATTGGCGGCGCGAGAATCGCTGGCCTGATTTCTGCCGCGAACCAGGGCT
CCGCTACGATTGCCGACGCGAAGCTGACAGACTGGTTGCCGCCGGGCGCGCGGTCAATGCCGGAAATGCCGCATTCCGGT
GA

Upstream 100 bases:

>100_bases
TGCGTCAATTCGGTGTTATTCAGTCGCGGGGATAAGAGATCAGGGCGCGCAGATCCCCATGTCAGGAGACTGCGCCGTGC
ATGCGACATTCGTGACGAGT

Downstream 100 bases:

>100_bases
AGACCATCGCCAGCCCGGCTTTGTTCGCGGCTGCGATCACCTCATCGTCGCGGATCGATCCGCCGGGCTGGATCACGCAG
GTCGCGCCCGCCTCGACCGC

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 772

Protein sequence:

>773_residues
MPGSTCGSPTFRLLGDFAVEPALLAPHGRKARALLARLALADGPLSRDRLSALLWSHRAEPQAHASLRQCLMELKAWTRA
SPPLLHADRDAIAIDHAHVADDVSLLLSACACDDADAVLRWLPADEVALLADLDGVDEAFDDWLAAERARNTEVVVREVL
AMAERLLVAGDIDGSLRVADRMTRFDPCSEHAARLVMQARWQAGDDDGVRHAWHRLEDAVARGLDGRPSPETARLYHRLM
DEPSCRSNEVALQTGKKPPPDRRTHRIATVAATVAAFGLMSADAPREGGGEPAMMTPTVRIEPVVSRNHGMIELGFADAL
AGDFVRLANASGGLVRILDGEAVGRGDFIVRVAINRDDGNLTSESRVVDARSGAILWSSRLSGSPRDLTRLREQTAVSVA
AVIDCALRLNDGQAALAADADRRAQVFAICDAHDDQDGARAVALLERFAARWPGDRVALGQLALARAKLIFGEAETAEQE
RQRQLAIRAARRALANDPANVYAMVALSQAGRRERYMVDGLPMLKRALSVDPRFSTALMLQATGLFQAGYVAASVRPSID
AANADPTSIVRALAVVRRLAAAGRMKEAWDRLDAVAAVWPDHPDLVEHRYRLTLEQPDRVRAAALVASSGVDDRWRLDRL
ILQQVATGRQDSAALDAAAEIEYSRLPAAAYQLAALYTRIGDIRRALIWLDRAPVRQTSGQWSLLYWPSVAPLRREPRFF
AKMAQLGLVDYWRRENRWPDFCREPGLRYDCRREADRLVAAGRAVNAGNAAFR

Sequences:

>Translated_773_residues
MPGSTCGSPTFRLLGDFAVEPALLAPHGRKARALLARLALADGPLSRDRLSALLWSHRAEPQAHASLRQCLMELKAWTRA
SPPLLHADRDAIAIDHAHVADDVSLLLSACACDDADAVLRWLPADEVALLADLDGVDEAFDDWLAAERARNTEVVVREVL
AMAERLLVAGDIDGSLRVADRMTRFDPCSEHAARLVMQARWQAGDDDGVRHAWHRLEDAVARGLDGRPSPETARLYHRLM
DEPSCRSNEVALQTGKKPPPDRRTHRIATVAATVAAFGLMSADAPREGGGEPAMMTPTVRIEPVVSRNHGMIELGFADAL
AGDFVRLANASGGLVRILDGEAVGRGDFIVRVAINRDDGNLTSESRVVDARSGAILWSSRLSGSPRDLTRLREQTAVSVA
AVIDCALRLNDGQAALAADADRRAQVFAICDAHDDQDGARAVALLERFAARWPGDRVALGQLALARAKLIFGEAETAEQE
RQRQLAIRAARRALANDPANVYAMVALSQAGRRERYMVDGLPMLKRALSVDPRFSTALMLQATGLFQAGYVAASVRPSID
AANADPTSIVRALAVVRRLAAAGRMKEAWDRLDAVAAVWPDHPDLVEHRYRLTLEQPDRVRAAALVASSGVDDRWRLDRL
ILQQVATGRQDSAALDAAAEIEYSRLPAAAYQLAALYTRIGDIRRALIWLDRAPVRQTSGQWSLLYWPSVAPLRREPRFF
AKMAQLGLVDYWRRENRWPDFCREPGLRYDCRREADRLVAAGRAVNAGNAAFR
>Mature_772_residues
PGSTCGSPTFRLLGDFAVEPALLAPHGRKARALLARLALADGPLSRDRLSALLWSHRAEPQAHASLRQCLMELKAWTRAS
PPLLHADRDAIAIDHAHVADDVSLLLSACACDDADAVLRWLPADEVALLADLDGVDEAFDDWLAAERARNTEVVVREVLA
MAERLLVAGDIDGSLRVADRMTRFDPCSEHAARLVMQARWQAGDDDGVRHAWHRLEDAVARGLDGRPSPETARLYHRLMD
EPSCRSNEVALQTGKKPPPDRRTHRIATVAATVAAFGLMSADAPREGGGEPAMMTPTVRIEPVVSRNHGMIELGFADALA
GDFVRLANASGGLVRILDGEAVGRGDFIVRVAINRDDGNLTSESRVVDARSGAILWSSRLSGSPRDLTRLREQTAVSVAA
VIDCALRLNDGQAALAADADRRAQVFAICDAHDDQDGARAVALLERFAARWPGDRVALGQLALARAKLIFGEAETAEQER
QRQLAIRAARRALANDPANVYAMVALSQAGRRERYMVDGLPMLKRALSVDPRFSTALMLQATGLFQAGYVAASVRPSIDA
ANADPTSIVRALAVVRRLAAAGRMKEAWDRLDAVAAVWPDHPDLVEHRYRLTLEQPDRVRAAALVASSGVDDRWRLDRLI
LQQVATGRQDSAALDAAAEIEYSRLPAAAYQLAALYTRIGDIRRALIWLDRAPVRQTSGQWSLLYWPSVAPLRREPRFFA
KMAQLGLVDYWRRENRWPDFCREPGLRYDCRREADRLVAAGRAVNAGNAAFR

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84640; Mature: 84509

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGSTCGSPTFRLLGDFAVEPALLAPHGRKARALLARLALADGPLSRDRLSALLWSHRAE
CCCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PQAHASLRQCLMELKAWTRASPPLLHADRDAIAIDHAHVADDVSLLLSACACDDADAVLR
CHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHH
WLPADEVALLADLDGVDEAFDDWLAAERARNTEVVVREVLAMAERLLVAGDIDGSLRVAD
HCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHH
RMTRFDPCSEHAARLVMQARWQAGDDDGVRHAWHRLEDAVARGLDGRPSPETARLYHRLM
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
DEPSCRSNEVALQTGKKPPPDRRTHRIATVAATVAAFGLMSADAPREGGGEPAMMTPTVR
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEE
IEPVVSRNHGMIELGFADALAGDFVRLANASGGLVRILDGEAVGRGDFIVRVAINRDDGN
EEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCC
LTSESRVVDARSGAILWSSRLSGSPRDLTRLREQTAVSVAAVIDCALRLNDGQAALAADA
CCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCC
DRRAQVFAICDAHDDQDGARAVALLERFAARWPGDRVALGQLALARAKLIFGEAETAEQE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
RQRQLAIRAARRALANDPANVYAMVALSQAGRRERYMVDGLPMLKRALSVDPRFSTALML
HHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCCCCCEEECCHHHHHHHHCCCCCCCCEEEE
QATGLFQAGYVAASVRPSIDAANADPTSIVRALAVVRRLAAAGRMKEAWDRLDAVAAVWP
EECCCHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
DHPDLVEHRYRLTLEQPDRVRAAALVASSGVDDRWRLDRLILQQVATGRQDSAALDAAAE
CCHHHHHHHHEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IEYSRLPAAAYQLAALYTRIGDIRRALIWLDRAPVRQTSGQWSLLYWPSVAPLRREPRFF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHH
AKMAQLGLVDYWRRENRWPDFCREPGLRYDCRREADRLVAAGRAVNAGNAAFR
HHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PGSTCGSPTFRLLGDFAVEPALLAPHGRKARALLARLALADGPLSRDRLSALLWSHRAE
CCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PQAHASLRQCLMELKAWTRASPPLLHADRDAIAIDHAHVADDVSLLLSACACDDADAVLR
CHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHH
WLPADEVALLADLDGVDEAFDDWLAAERARNTEVVVREVLAMAERLLVAGDIDGSLRVAD
HCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHH
RMTRFDPCSEHAARLVMQARWQAGDDDGVRHAWHRLEDAVARGLDGRPSPETARLYHRLM
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
DEPSCRSNEVALQTGKKPPPDRRTHRIATVAATVAAFGLMSADAPREGGGEPAMMTPTVR
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEE
IEPVVSRNHGMIELGFADALAGDFVRLANASGGLVRILDGEAVGRGDFIVRVAINRDDGN
EEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCC
LTSESRVVDARSGAILWSSRLSGSPRDLTRLREQTAVSVAAVIDCALRLNDGQAALAADA
CCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCC
DRRAQVFAICDAHDDQDGARAVALLERFAARWPGDRVALGQLALARAKLIFGEAETAEQE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
RQRQLAIRAARRALANDPANVYAMVALSQAGRRERYMVDGLPMLKRALSVDPRFSTALML
HHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCCCCCEEECCHHHHHHHHCCCCCCCCEEEE
QATGLFQAGYVAASVRPSIDAANADPTSIVRALAVVRRLAAAGRMKEAWDRLDAVAAVWP
EECCCHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
DHPDLVEHRYRLTLEQPDRVRAAALVASSGVDDRWRLDRLILQQVATGRQDSAALDAAAE
CCHHHHHHHHEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IEYSRLPAAAYQLAALYTRIGDIRRALIWLDRAPVRQTSGQWSLLYWPSVAPLRREPRFF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHH
AKMAQLGLVDYWRRENRWPDFCREPGLRYDCRREADRLVAAGRAVNAGNAAFR
HHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA