| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488541
Identifier: 103488541
GI number: 103488541
Start: 3215487
End: 3215744
Strand: Reverse
Name: 103488541
Synonym: Sala_3065
Alternate gene names: NA
Gene position: 3215744-3215487 (Counterclockwise)
Preceding gene: 103488542
Following gene: 103488538
Centisome position: 96.13
GC content: 65.5
Gene sequence:
>258_bases ATGATATTGATCCACCGTGATTGCCCCCTGAAGTTCGTCGGCAAGAAGCGTCTCGCAGGACGGGCTGGTTGCCCGGACCA GAGACGCGCCGCTGTCCGGCGGGCTTCAGGGGGCAACCCCTCCGGGGCGGGCCGATTCTGGCCGATTGCCACGTTGCTCG TCGGGCGCGATGTCCCGCATCGCGCCGCTCCTCGCGCCTCGCACTCGGCCAAAATCGCCTCCGTCACGGTGGATCAATAT CAGGTCATCGCGCTCTAA
Upstream 100 bases:
>100_bases TGACAAACTCGCCGCAAACTTCCTTGGCTTCATCAAACTCGCAAGCATAATGTTGTGGCTCAAATGATTAAATTGTCACT ACAGCCTAGAGCGCGATGAC
Downstream 100 bases:
>100_bases GGCGTCGGCCTCAGCCCTTTTCGCCGGGAAAAAAGCGCGCGATCACGTCGCTTGCCAGCCGCGCGGGGCGCAGCGTTTCG GCGTCGATGCAGCACCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MILIHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRAAPRASHSAKIASVTVDQY QVIAL
Sequences:
>Translated_85_residues MILIHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRAAPRASHSAKIASVTVDQY QVIAL >Mature_85_residues MILIHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRAAPRASHSAKIASVTVDQY QVIAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9140; Mature: 9140
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPH CEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC RAAPRASHSAKIASVTVDQYQVIAL CCCCCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure MILIHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPH CEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC RAAPRASHSAKIASVTVDQYQVIAL CCCCCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA