| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488527
Identifier: 103488527
GI number: 103488527
Start: 3202512
End: 3202814
Strand: Direct
Name: 103488527
Synonym: Sala_3051
Alternate gene names: NA
Gene position: 3202512-3202814 (Clockwise)
Preceding gene: 103488526
Following gene: 103488528
Centisome position: 95.74
GC content: 67.0
Gene sequence:
>303_bases ATGGACGTTCGCCTGCTTGCCATCGCCGCCGCCCTGCCGCTCGCCGCCTGCATGAGCAGCGAAGCGCCCGTCGAATCGAC CCCGCCGCCGCCCGGCGAAATGACCTGCAACGCCGACGCGGTGCAGAGCCATGTCGGCCATCGTGCCAGTGCCGAAATGG GCGCGGCTATCCTCCGGGAATCGGGCGCACGCACGCTGCGCTGGGCCCCGCCGCGCTCGGCGATGACGATGGATTATCGT CAGGACCGGGTGAATGTGATGTATGACGACGCCTACAAGATCACGCAGGTCACTTGTGGCTGA
Upstream 100 bases:
>100_bases CAGGCGCTTGTGCGCCGCGACGCGGGCGAGGGTGCCGCGGCGGATGCGATGCGCTATACGCGCTGTGCCGGATGACGGTG TTTTGAAAGGGAGACACATC
Downstream 100 bases:
>100_bases CGGCGTGCGGCGCAATCATTCGTCGGCTTCTCCGTTCGAGCCCGTCTATGGCTACAGCCGCGCGGTTCGGGTGGGCAGTC GCATCGACGTTGCGGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MDVRLLAIAAALPLAACMSSEAPVESTPPPPGEMTCNADAVQSHVGHRASAEMGAAILRESGARTLRWAPPRSAMTMDYR QDRVNVMYDDAYKITQVTCG
Sequences:
>Translated_100_residues MDVRLLAIAAALPLAACMSSEAPVESTPPPPGEMTCNADAVQSHVGHRASAEMGAAILRESGARTLRWAPPRSAMTMDYR QDRVNVMYDDAYKITQVTCG >Mature_100_residues MDVRLLAIAAALPLAACMSSEAPVESTPPPPGEMTCNADAVQSHVGHRASAEMGAAILRESGARTLRWAPPRSAMTMDYR QDRVNVMYDDAYKITQVTCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10721; Mature: 10721
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRLLAIAAALPLAACMSSEAPVESTPPPPGEMTCNADAVQSHVGHRASAEMGAAILRE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCHHHHHHHHHH SGARTLRWAPPRSAMTMDYRQDRVNVMYDDAYKITQVTCG CCCCEEEECCCCCCEECCCCCCCCEEEECCCEEEEEEECC >Mature Secondary Structure MDVRLLAIAAALPLAACMSSEAPVESTPPPPGEMTCNADAVQSHVGHRASAEMGAAILRE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCHHHHHHHHHH SGARTLRWAPPRSAMTMDYRQDRVNVMYDDAYKITQVTCG CCCCEEEECCCCCCEECCCCCCCCEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA