| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is nemA [H]
Identifier: 103488461
GI number: 103488461
Start: 3126615
End: 3127700
Strand: Reverse
Name: nemA [H]
Synonym: Sala_2984
Alternate gene names: 103488461
Gene position: 3127700-3126615 (Counterclockwise)
Preceding gene: 103488467
Following gene: 103488460
Centisome position: 93.5
GC content: 67.68
Gene sequence:
>1086_bases ATGACCGCATCGCTGTTCCAGCCGATCACGCTGGGCGCCATCGAAGCGCCGAACCGCATCATCATGGCGCCGCTGACGCG CGGCCGCGCGGGACCGGGCTTCGTTCCCAATGAGCTCGCGCGCGAATATTATCGCCAGCGCGCCTCGGCGGGGCTGATCA TTTCGGAAGCGACGGGGATTTCGCAGGAGGGGCTCGGCTGGCCGAATGCGCCGGGCCTGTGGACCGATGCGCAGGTCGAA GGCTGGAAGCCGGTGACCGAAGCCGTCCATGAGGCGGGGGGCCGCATCGTTGCCCAGCTCTGGCATATGGGCCGCGTCGT CCATTCGGTGTTCAACGACGGCAAACCACCCGTCTCGGCTTCGGCGACGCGGGCGCCAGGCAAGGCGCACACCCCGGTCG GCCGCCTCGAATATGAAGTTGCGCGCCCGCTCGAACCGGGCGAAATCCCGCGCGTCATCGCCGATTATGCGAAGGCCGCC GAAAATGCGAAGCGCGCCGGTTTCGACGGCGTCCAGCTGCACGGCGCAAACGGTTATCTGATCGACCAGTTCCTGCGCGA CAATTCAAATCTGCGCGACGATGATTATGGCGGCCCGGTCGAAAACCGCATCCGCCTGCTCCGCGAAGTGACCGAAGCGC TGATCTCGGTCTGGGGCGCCGACCGCGTCGGTGTGCGTCTCTCGCCCAATGGCGATACGCAGGGCGTCGACGACAGCGCG CCCGAAAGGCTGTTCCCGATCGCCGCGGCGGCGCTCGACGCGCTCGGCATCGCCTTCCTCGAGTTGCGCGAGCCCGGCCC CGACGGCACATTCGGCAGAACGGATGTGCCCAAGCAGTCGCCGTCGATCCGCGCCGCGTTCAGGGGCCCGCTGATCCTCA ACAGCGACTACACCGCCGCGCTCGCCGACGAAGCGATCGCCAGCGGCATCGCCGACGCGATCGCCTTCGGGCGGCCCTTC ATCGCCAATCCCGACCTCGTCGAGCGCATCCGCACCGGCGCCGAATGGGCCGCCGACAATCCGCAGACCTGGTATTCGCC GGGGCCCGAAGGTTACATCGATTATCCGGTACTGGAGGCGGCCTGA
Upstream 100 bases:
>100_bases CACTTACCCATTGTGCCGACGCGGCGTGACCCATAGCTTCGTCATCGAGCGCGGCGACCAAGGGGGCCGTCGGCGCAGCA TTTGACGAGATGGAGGAAAT
Downstream 100 bases:
>100_bases TCGGAGACGGGTCGTCCCCGCACAGGCGGGGGCGGCCCGCCCTATCCCTTTTCCGCCAACGCCTTGTCGATGATGCTCGC ACCGATCGGCGCCAATATCC
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTASLFQPITLGAIEAPNRIIMAPLTRGRAGPGFVPNELAREYYRQRASAGLIISEATGISQEGLGWPNAPGLWTDAQVE GWKPVTEAVHEAGGRIVAQLWHMGRVVHSVFNDGKPPVSASATRAPGKAHTPVGRLEYEVARPLEPGEIPRVIADYAKAA ENAKRAGFDGVQLHGANGYLIDQFLRDNSNLRDDDYGGPVENRIRLLREVTEALISVWGADRVGVRLSPNGDTQGVDDSA PERLFPIAAAALDALGIAFLELREPGPDGTFGRTDVPKQSPSIRAAFRGPLILNSDYTAALADEAIASGIADAIAFGRPF IANPDLVERIRTGAEWAADNPQTWYSPGPEGYIDYPVLEAA
Sequences:
>Translated_361_residues MTASLFQPITLGAIEAPNRIIMAPLTRGRAGPGFVPNELAREYYRQRASAGLIISEATGISQEGLGWPNAPGLWTDAQVE GWKPVTEAVHEAGGRIVAQLWHMGRVVHSVFNDGKPPVSASATRAPGKAHTPVGRLEYEVARPLEPGEIPRVIADYAKAA ENAKRAGFDGVQLHGANGYLIDQFLRDNSNLRDDDYGGPVENRIRLLREVTEALISVWGADRVGVRLSPNGDTQGVDDSA PERLFPIAAAALDALGIAFLELREPGPDGTFGRTDVPKQSPSIRAAFRGPLILNSDYTAALADEAIASGIADAIAFGRPF IANPDLVERIRTGAEWAADNPQTWYSPGPEGYIDYPVLEAA >Mature_360_residues TASLFQPITLGAIEAPNRIIMAPLTRGRAGPGFVPNELAREYYRQRASAGLIISEATGISQEGLGWPNAPGLWTDAQVEG WKPVTEAVHEAGGRIVAQLWHMGRVVHSVFNDGKPPVSASATRAPGKAHTPVGRLEYEVARPLEPGEIPRVIADYAKAAE NAKRAGFDGVQLHGANGYLIDQFLRDNSNLRDDDYGGPVENRIRLLREVTEALISVWGADRVGVRLSPNGDTQGVDDSAP ERLFPIAAAALDALGIAFLELREPGPDGTFGRTDVPKQSPSIRAAFRGPLILNSDYTAALADEAIASGIADAIAFGRPFI ANPDLVERIRTGAEWAADNPQTWYSPGPEGYIDYPVLEAA
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=367, Percent_Identity=45.5040871934605, Blast_Score=288, Evalue=3e-79, Organism=Escherichia coli, GI1789463, Length=344, Percent_Identity=29.3604651162791, Blast_Score=119, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17565138, Length=353, Percent_Identity=29.7450424929178, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17559802, Length=271, Percent_Identity=29.8892988929889, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17559804, Length=271, Percent_Identity=28.7822878228782, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI72001454, Length=271, Percent_Identity=29.1512915129151, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17564188, Length=262, Percent_Identity=27.0992366412214, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17540738, Length=273, Percent_Identity=27.8388278388278, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6325086, Length=380, Percent_Identity=36.3157894736842, Blast_Score=200, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321973, Length=380, Percent_Identity=35.5263157894737, Blast_Score=196, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38701; Mature: 38570
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASLFQPITLGAIEAPNRIIMAPLTRGRAGPGFVPNELAREYYRQRASAGLIISEATGI CCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCC SQEGLGWPNAPGLWTDAQVEGWKPVTEAVHEAGGRIVAQLWHMGRVVHSVFNDGKPPVSA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC SATRAPGKAHTPVGRLEYEVARPLEPGEIPRVIADYAKAAENAKRAGFDGVQLHGANGYL CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH IDQFLRDNSNLRDDDYGGPVENRIRLLREVTEALISVWGADRVGVRLSPNGDTQGVDDSA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC PERLFPIAAAALDALGIAFLELREPGPDGTFGRTDVPKQSPSIRAAFRGPLILNSDYTAA CHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHH LADEAIASGIADAIAFGRPFIANPDLVERIRTGAEWAADNPQTWYSPGPEGYIDYPVLEA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCC A C >Mature Secondary Structure TASLFQPITLGAIEAPNRIIMAPLTRGRAGPGFVPNELAREYYRQRASAGLIISEATGI CCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCC SQEGLGWPNAPGLWTDAQVEGWKPVTEAVHEAGGRIVAQLWHMGRVVHSVFNDGKPPVSA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC SATRAPGKAHTPVGRLEYEVARPLEPGEIPRVIADYAKAAENAKRAGFDGVQLHGANGYL CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH IDQFLRDNSNLRDDDYGGPVENRIRLLREVTEALISVWGADRVGVRLSPNGDTQGVDDSA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC PERLFPIAAAALDALGIAFLELREPGPDGTFGRTDVPKQSPSIRAAFRGPLILNSDYTAA CHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHH LADEAIASGIADAIAFGRPFIANPDLVERIRTGAEWAADNPQTWYSPGPEGYIDYPVLEA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]