| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yeaC [H]
Identifier: 103488442
GI number: 103488442
Start: 3109145
End: 3110041
Strand: Direct
Name: yeaC [H]
Synonym: Sala_2965
Alternate gene names: 103488442
Gene position: 3109145-3110041 (Clockwise)
Preceding gene: 103488441
Following gene: 103488443
Centisome position: 92.94
GC content: 68.9
Gene sequence:
>897_bases GTGTTCGGGCAGGGGCCGCTCACCCGCATGGTGACGATCGCGCTGCTCGCGGGCGGCCATGTCCTGCTCGAAGGGCCGCC GGGCACCGCCAAGACCTTGCTCGCGCAGGCCTTCGCGCGCGCGAGCGGCCTCGATTTCGGGCGCATCCAGTTTACCCCCG ATTTGATGCCCGGCGACATTTTGGGGTCGAACCTCTTCAACTTCCAGACGTCGAGCTTCACGCTCACCAAGGGTCCGATC TTCGCCGAATTGCTGCTCGCCGACGAAATCAACCGCACCCCGCCCAAGACGCAGGCCGCGCTGCTCGAGGCGATGCAGGA ACGGCGGGTGACCATCAATGGCGAGCCGCATGTGATGAGCCCGCGCTTCACCGTGCTCGCGACGCAGAACCCCATCGAAC AGCAGGGCGTCTATCCGCTGCCCGAAGCGCAGCTCGACCGCTTCCTGTTCAAGCTTGTCGTCGATTATCCCGCGGCGGAC GAGGAACGGCGGATCGTCGCCGACCATGGCGGCCGCTTCAACAGCCCCGCGGTCGGCGATTTCGGGGTCACGCAGGTCGC CGATGCCGCGGCGATCGGCGCGGCGATCGACGTCATAGCGACCGTCCGGCTCGCCGAAGAAATTGTCGATTATATCGTCC GCCTTGTCCGCGCGACTCGCGAAAGCGCCGACCTCGAATGCGGCGCGTCCCCACGCGCCGCGACCCTGCTCGCGCGCGCG GCGTGCGCGGCGGCGGCGCTCGACGGGCGCGACTATGTGATCCCCGACGACGTCCAGCGCCTCGCCGCCGGGGTGCTGCG CCACCGCGTCATCCTGTCGGCGGCCGCCGAGATCGAGGGGCGCAGCGTCGAACAGGTCGTCGCCGCGCTGCTCGAACGCG AGGCTGTGCCACGGTGA
Upstream 100 bases:
>100_bases CAGGCGCTGCACGCCATCAGGAAGGATCTACTCCGTGACAGCTGACATCCAGGGCGTTCAGGCGCTCGGCGCCGCGATCG AGGGCGAGGTCGCCAAGGCC
Downstream 100 bases:
>100_bases TCTACCCCACCCGCCGCGCCATCTATCTGCTGCTCGCGGGTGCGCCGCTGGCGCTGGTGCTCGGACTGGTCCGGCCCGAG CTGTGGCTGGTCGCGCCCGG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MFGQGPLTRMVTIALLAGGHVLLEGPPGTAKTLLAQAFARASGLDFGRIQFTPDLMPGDILGSNLFNFQTSSFTLTKGPI FAELLLADEINRTPPKTQAALLEAMQERRVTINGEPHVMSPRFTVLATQNPIEQQGVYPLPEAQLDRFLFKLVVDYPAAD EERRIVADHGGRFNSPAVGDFGVTQVADAAAIGAAIDVIATVRLAEEIVDYIVRLVRATRESADLECGASPRAATLLARA ACAAAALDGRDYVIPDDVQRLAAGVLRHRVILSAAAEIEGRSVEQVVAALLEREAVPR
Sequences:
>Translated_298_residues MFGQGPLTRMVTIALLAGGHVLLEGPPGTAKTLLAQAFARASGLDFGRIQFTPDLMPGDILGSNLFNFQTSSFTLTKGPI FAELLLADEINRTPPKTQAALLEAMQERRVTINGEPHVMSPRFTVLATQNPIEQQGVYPLPEAQLDRFLFKLVVDYPAAD EERRIVADHGGRFNSPAVGDFGVTQVADAAAIGAAIDVIATVRLAEEIVDYIVRLVRATRESADLECGASPRAATLLARA ACAAAALDGRDYVIPDDVQRLAAGVLRHRVILSAAAEIEGRSVEQVVAALLEREAVPR >Mature_298_residues MFGQGPLTRMVTIALLAGGHVLLEGPPGTAKTLLAQAFARASGLDFGRIQFTPDLMPGDILGSNLFNFQTSSFTLTKGPI FAELLLADEINRTPPKTQAALLEAMQERRVTINGEPHVMSPRFTVLATQNPIEQQGVYPLPEAQLDRFLFKLVVDYPAAD EERRIVADHGGRFNSPAVGDFGVTQVADAAAIGAAIDVIATVRLAEEIVDYIVRLVRATRESADLECGASPRAATLLARA ACAAAALDGRDYVIPDDVQRLAAGVLRHRVILSAAAEIEGRSVEQVVAALLEREAVPR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 31902; Mature: 31902
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGQGPLTRMVTIALLAGGHVLLEGPPGTAKTLLAQAFARASGLDFGRIQFTPDLMPGDI CCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH LGSNLFNFQTSSFTLTKGPIFAELLLADEINRTPPKTQAALLEAMQERRVTINGEPHVMS HCCCHHCEECCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCEEC PRFTVLATQNPIEQQGVYPLPEAQLDRFLFKLVVDYPAADEERRIVADHGGRFNSPAVGD CCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC FGVTQVADAAAIGAAIDVIATVRLAEEIVDYIVRLVRATRESADLECGASPRAATLLARA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ACAAAALDGRDYVIPDDVQRLAAGVLRHRVILSAAAEIEGRSVEQVVAALLEREAVPR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MFGQGPLTRMVTIALLAGGHVLLEGPPGTAKTLLAQAFARASGLDFGRIQFTPDLMPGDI CCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH LGSNLFNFQTSSFTLTKGPIFAELLLADEINRTPPKTQAALLEAMQERRVTINGEPHVMS HCCCHHCEECCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCCCEEC PRFTVLATQNPIEQQGVYPLPEAQLDRFLFKLVVDYPAADEERRIVADHGGRFNSPAVGD CCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC FGVTQVADAAAIGAAIDVIATVRLAEEIVDYIVRLVRATRESADLECGASPRAATLLARA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ACAAAALDGRDYVIPDDVQRLAAGVLRHRVILSAAAEIEGRSVEQVVAALLEREAVPR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]