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The map label for this gene is fliD [H]

Identifier: 103488399

GI number: 103488399

Start: 3069156

End: 3070526

Strand: Reverse

Name: fliD [H]

Synonym: Sala_2922

Alternate gene names: 103488399

Gene position: 3070526-3069156 (Counterclockwise)

Preceding gene: 103488400

Following gene: 103488398

Centisome position: 91.79

GC content: 65.5

Gene sequence:

>1371_bases
ATGGTCAATTCCATCGCCAACAGCCTGGGTTTCGGGTCGGGCATCGACATTCCCAAGCTCGTCGACGACCTGTCCAATGC
CTCGCGTCAGCCCAAGATCGCGCGCCTCACCGAATTGACGCAGGCGAACCAGACGCGGATCAGCGCGGTGGCCAAGGCGC
GCGCCGACCTCGATGGATTCGCCGATTCGCTGAGCCAGATGATCGGCGACGGGACGCTGCGCAGCACGCCCACCGTATCC
GACGACAGCGTGCTTGGCGCGACCAGCCGCGCGGGCCTGTCCGCCGACAGCTTTGCCGCGACTGTCGTAGTCAATCAGCT
TGCGCGCGCGCAGACCAATTTTTCGGGCGTCGTCGCCGATCGCACCGCCGCAATCGGCACCGGCACGATGACGCTGACCG
TCGGTGGCGTCGCGAAAACGATCACGATCGACGGGACCAACAACAATCTTGACGGACTGGCCGATGCCATCAATGCGAGC
GCGGCGGGCGTCACCGCCTCCATCATCGCCGACGAGGGCGGGCACCGCCTCATCCTCAAAGGCCCGACGGGCGAAGCCAA
TGGCTTTACGCTCGTCGCCGATGCCGGTGCCGACCCGGGGCTCGCCTCCTTTGCCACCGACGGCGGCATGACGCTCGGCC
AGAGCGCCGCCGACGCCGAGTTCACGATCGACGGCATCGCCTTCAACCGCGCGACCAACATCGTCGATGACGTCGTGCCC
GGCATGTCGCTGACCCTGAAAAAGGCGGCGCCCGGCCAGCCCGTCGACATCGGCGCCAACCGCCCGCTCGACATGATCAA
GCAGACGGTGGGCGACTTCGTCGCGGTCTATAACCAGCTCAAGGCCAGCCTCACCGCCGCTTCGAACCTTCCCGGCGCGA
CGACTTCGCTCCGCGAACTCGAACGCGACCTCGGCGGCCTGATCCACCAGGTGATTTCGAGCCACGGCAGCATCAACCAG
CTTTCGGACATCGGCATTTCGGTGACCAAGGAAGGGTTGCTGTCGGTCGACAATGCGCGGCTCGACAAGGCACTCGAAAC
CGATGCCGGTGCCGTCGAGGCCCTGTTCAACCCGCGCCGCGACGCGACGCACAACGAAACGACCGATCCCGGCATCGCCT
TTGCGCTCGACGCGATCCGCGACAGGGCGGTTGGCGCCAATGGCGCGATCGACCGCGTGTCGCGCTCGCTCGAAACCAGG
CAGAGGACTCTCGCCGAACAGCTTGCGAAGGTCGAGGAGCGCGAAGACGCCTACCGCACGCGGCTGGAGAAACAATATGG
CGCGCTCGAAGCCAGGCTCGCGGCGTTCAAGGCCACGCAGACCTATCTCGAACAGCAGATCAAGCTCTGGACCAACCAGG
GCAACGATTAA

Upstream 100 bases:

>100_bases
GGTCGATGTGCCGCCCTCGCACCGTTTCGATCCTGAAGGCCGCCGCCAGGCTTAAGATGCGCCGCGCACTGCCGTTAAGG
GGTGCGAAGGATATTTCGCC

Downstream 100 bases:

>100_bases
GATATAGGCACCGAGGACCACCGCCGTGACCGCCACCGCATCGACCGTCCGGGCGACCGGGCTTTACCGCCGATTGCAGA
ATGAGAGCCGCGCCGCCGCC

Product: flagellar hook-associated 2-like protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MVNSIANSLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGFADSLSQMIGDGTLRSTPTVS
DDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVADRTAAIGTGTMTLTVGGVAKTITIDGTNNNLDGLADAINAS
AAGVTASIIADEGGHRLILKGPTGEANGFTLVADAGADPGLASFATDGGMTLGQSAADAEFTIDGIAFNRATNIVDDVVP
GMSLTLKKAAPGQPVDIGANRPLDMIKQTVGDFVAVYNQLKASLTAASNLPGATTSLRELERDLGGLIHQVISSHGSINQ
LSDIGISVTKEGLLSVDNARLDKALETDAGAVEALFNPRRDATHNETTDPGIAFALDAIRDRAVGANGAIDRVSRSLETR
QRTLAEQLAKVEEREDAYRTRLEKQYGALEARLAAFKATQTYLEQQIKLWTNQGND

Sequences:

>Translated_456_residues
MVNSIANSLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGFADSLSQMIGDGTLRSTPTVS
DDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVADRTAAIGTGTMTLTVGGVAKTITIDGTNNNLDGLADAINAS
AAGVTASIIADEGGHRLILKGPTGEANGFTLVADAGADPGLASFATDGGMTLGQSAADAEFTIDGIAFNRATNIVDDVVP
GMSLTLKKAAPGQPVDIGANRPLDMIKQTVGDFVAVYNQLKASLTAASNLPGATTSLRELERDLGGLIHQVISSHGSINQ
LSDIGISVTKEGLLSVDNARLDKALETDAGAVEALFNPRRDATHNETTDPGIAFALDAIRDRAVGANGAIDRVSRSLETR
QRTLAEQLAKVEEREDAYRTRLEKQYGALEARLAAFKATQTYLEQQIKLWTNQGND
>Mature_456_residues
MVNSIANSLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGFADSLSQMIGDGTLRSTPTVS
DDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVADRTAAIGTGTMTLTVGGVAKTITIDGTNNNLDGLADAINAS
AAGVTASIIADEGGHRLILKGPTGEANGFTLVADAGADPGLASFATDGGMTLGQSAADAEFTIDGIAFNRATNIVDDVVP
GMSLTLKKAAPGQPVDIGANRPLDMIKQTVGDFVAVYNQLKASLTAASNLPGATTSLRELERDLGGLIHQVISSHGSINQ
LSDIGISVTKEGLLSVDNARLDKALETDAGAVEALFNPRRDATHNETTDPGIAFALDAIRDRAVGANGAIDRVSRSLETR
QRTLAEQLAKVEEREDAYRTRLEKQYGALEARLAAFKATQTYLEQQIKLWTNQGND

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=478, Percent_Identity=28.4518828451883, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 47447; Mature: 47447

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNSIANSLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGF
CCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADSLSQMIGDGTLRSTPTVSDDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVAD
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEC
RTAAIGTGTMTLTVGGVAKTITIDGTNNNLDGLADAINASAAGVTASIIADEGGHRLILK
CHHEEECCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
GPTGEANGFTLVADAGADPGLASFATDGGMTLGQSAADAEFTIDGIAFNRATNIVDDVVP
CCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECEEHHHHHHHHHHHCC
GMSLTLKKAAPGQPVDIGANRPLDMIKQTVGDFVAVYNQLKASLTAASNLPGATTSLREL
CCCEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ERDLGGLIHQVISSHGSINQLSDIGISVTKEGLLSVDNARLDKALETDAGAVEALFNPRR
HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCC
DATHNETTDPGIAFALDAIRDRAVGANGAIDRVSRSLETRQRTLAEQLAKVEEREDAYRT
CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEKQYGALEARLAAFKATQTYLEQQIKLWTNQGND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVNSIANSLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGF
CCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADSLSQMIGDGTLRSTPTVSDDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVAD
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEC
RTAAIGTGTMTLTVGGVAKTITIDGTNNNLDGLADAINASAAGVTASIIADEGGHRLILK
CHHEEECCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
GPTGEANGFTLVADAGADPGLASFATDGGMTLGQSAADAEFTIDGIAFNRATNIVDDVVP
CCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECEEHHHHHHHHHHHCC
GMSLTLKKAAPGQPVDIGANRPLDMIKQTVGDFVAVYNQLKASLTAASNLPGATTSLREL
CCCEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ERDLGGLIHQVISSHGSINQLSDIGISVTKEGLLSVDNARLDKALETDAGAVEALFNPRR
HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCC
DATHNETTDPGIAFALDAIRDRAVGANGAIDRVSRSLETRQRTLAEQLAKVEEREDAYRT
CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEKQYGALEARLAAFKATQTYLEQQIKLWTNQGND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]