Click here to switch to the map view.

The map label for this gene is betI [C]

Identifier: 103488360

GI number: 103488360

Start: 3035391

End: 3036026

Strand: Direct

Name: betI [C]

Synonym: Sala_2883

Alternate gene names: 103488360

Gene position: 3035391-3036026 (Clockwise)

Preceding gene: 103488358

Following gene: 103488361

Centisome position: 90.74

GC content: 63.36

Gene sequence:

>636_bases
ATGGATCAACCGCAGGCCGCACCAGGCGGAGGCGCGAGCGAAGCGCGCGACAAGACGCCGCGCACCGAACGCGGGCGCCG
CACCCTGCGCAAGCTGCTCGATGCCGCGGCGGTCGAGTTCGGCGAGCGCGGCTTTCACGAGGCGTCGATCAGCGCGATCA
CGCGCCGCGCCGGGACCGCGCTCGGCAGTTTCTATACCTATTTCGATTCGAAGGAGGAAATCTTCCAGGCGCTCGTGCGC
TATATGAGCGAGCAATTGCGCGACCATGTGACGCCGCGCGTTCAGGCCGCCCCCGACGAGATCCGCGCCGAACGCATCGG
GCTCGAATCCTATCTCGGCTTCGTGCGCGAGCATAAGGAGATTTACCGCATCATCGATGAGGCCGAGTTCGTCGATTACG
AAAGCTATCGCCGCCACTATGAAACGACGGTCGAGCGCATCCGGCAGCGACTGGAGGCCGGCGCCGCGCGCGGCGAAATC
CGCGCCGACGTCGGCGAAATCCACGCCTGGGCGATCGGCGGCATGAACGTGTTTCTGGGGATGCGTTACGGGCTGTGGGA
CACCGACAGCGACATTTCCGAAATTGCGCGGATCGCGAATGATATGCTGGCCAATGGCTTAAAAAAAAGAGATTGA

Upstream 100 bases:

>100_bases
CAACTTGGAATGTGCGCCGATCTTTTTTTGCTTGCCAGTGGTGCAGAAATGCCACGATTGAGCAGGCGGGCGGGCCGAAT
GAAGGGGAGGCGGAAGCACC

Downstream 100 bases:

>100_bases
AGGCCCGGTGGCCACTTACAGGGATATGCGATGCCTTACGCTCAATCAGCGCGAATGACTTTTGCCAACATGCTCGGCAC
GCTCGACCATCTTGTCGGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Transcriptional Regulator Tetr Family; Regulatory Protein; TetR Family Regulatory Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MDQPQAAPGGGASEARDKTPRTERGRRTLRKLLDAAAVEFGERGFHEASISAITRRAGTALGSFYTYFDSKEEIFQALVR
YMSEQLRDHVTPRVQAAPDEIRAERIGLESYLGFVREHKEIYRIIDEAEFVDYESYRRHYETTVERIRQRLEAGAARGEI
RADVGEIHAWAIGGMNVFLGMRYGLWDTDSDISEIARIANDMLANGLKKRD

Sequences:

>Translated_211_residues
MDQPQAAPGGGASEARDKTPRTERGRRTLRKLLDAAAVEFGERGFHEASISAITRRAGTALGSFYTYFDSKEEIFQALVR
YMSEQLRDHVTPRVQAAPDEIRAERIGLESYLGFVREHKEIYRIIDEAEFVDYESYRRHYETTVERIRQRLEAGAARGEI
RADVGEIHAWAIGGMNVFLGMRYGLWDTDSDISEIARIANDMLANGLKKRD
>Mature_211_residues
MDQPQAAPGGGASEARDKTPRTERGRRTLRKLLDAAAVEFGERGFHEASISAITRRAGTALGSFYTYFDSKEEIFQALVR
YMSEQLRDHVTPRVQAAPDEIRAERIGLESYLGFVREHKEIYRIIDEAEFVDYESYRRHYETTVERIRQRLEAGAARGEI
RADVGEIHAWAIGGMNVFLGMRYGLWDTDSDISEIARIANDMLANGLKKRD

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24003; Mature: 24003

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQPQAAPGGGASEARDKTPRTERGRRTLRKLLDAAAVEFGERGFHEASISAITRRAGTA
CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LGSFYTYFDSKEEIFQALVRYMSEQLRDHVTPRVQAAPDEIRAERIGLESYLGFVREHKE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IYRIIDEAEFVDYESYRRHYETTVERIRQRLEAGAARGEIRADVGEIHAWAIGGMNVFLG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MRYGLWDTDSDISEIARIANDMLANGLKKRD
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDQPQAAPGGGASEARDKTPRTERGRRTLRKLLDAAAVEFGERGFHEASISAITRRAGTA
CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LGSFYTYFDSKEEIFQALVRYMSEQLRDHVTPRVQAAPDEIRAERIGLESYLGFVREHKE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IYRIIDEAEFVDYESYRRHYETTVERIRQRLEAGAARGEIRADVGEIHAWAIGGMNVFLG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MRYGLWDTDSDISEIARIANDMLANGLKKRD
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA