| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is parA [H]
Identifier: 103488333
GI number: 103488333
Start: 3005694
End: 3006476
Strand: Direct
Name: parA [H]
Synonym: Sala_2856
Alternate gene names: 103488333
Gene position: 3005694-3006476 (Clockwise)
Preceding gene: 103488332
Following gene: 103488334
Centisome position: 89.85
GC content: 65.52
Gene sequence:
>783_bases ATGATCCGCATTGCCGTGGCAAACCAGAAGGGGGGGGTCGGCAAGACGACGACTGCGATCAATCTGGCGACCGCGCTCGC GGCGACGGGCTGGCGGACGCTGATTATCGACCTCGACCCGCAGGGTAATGCGTCGACCGGCCTCGGCATCAAGCAGTCGC AGCGCGAATGTTCGAGTTACGAACTGCTGCGCGGCGATGCGGGCGTCGCCGAATGCGCGATACCGACCGCGGTGCCGCGG CTCGACATCGTCAGCGCGACGGTCGATCTGTCGGGCGCCGAGATCGAACTGATCGAATATCAGGATCGGCTCCACCGGCT GCAGAAAGCGCTGTCGGGCGCCGAAGCGGGGCAATGGGATATTTGCCTGATCGACTGTCCGCCGTCGCTGGGGATGCTGA CCTTGAACGCGCTCATCGCCGCCGAATCGCTGATCGTGCCGCTGCAATGCGAATTTTTCGCGCTCGAGGGGCTGAGCCAG CTGCTCACGACGGTCGAGCGCGTGCGCGAGCGCTTCAACCAGAAACTGTCGATCCTCGGCGTCGCGCTCACCATGTTCGA CCGCCGCAACCGGCTGACCGACCAGGTGTCCGACGATGTGCGCGAGGTGCTGGGGCCGGTGGTGTTCGACACGGTGATCC CGCGCAATGTGCGCCTGTCCGAGGCGCCGAGCCATGGGCTTCCCGCGCTGATCTATGACCATCGCTGCGCCGGGTCGGCG GCCTATATCGCGCTCGCGCGCGAGATGATCGACCGGCTTCCCGAGATTCGCAAGGCGGCATAA
Upstream 100 bases:
>100_bases CATGGCAGAGAATGTTTCACGTGGAACAGAGCCGCACCGACGCCGAAAGCGGCATTTTGGTCGGCACGGGGCGTATCGCG CCGAAAAAGCGAGGGAAAGC
Downstream 100 bases:
>100_bases ATGTCTGATAAAAAGGAAGAAAACGCCGTAACACCGCCCCGCAAACGCCCATCGGGACTGGGCCGCGGGCTGAACGCGCT GTTCGGCGATGTCGCGGTCG
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MIRIAVANQKGGVGKTTTAINLATALAATGWRTLIIDLDPQGNASTGLGIKQSQRECSSYELLRGDAGVAECAIPTAVPR LDIVSATVDLSGAEIELIEYQDRLHRLQKALSGAEAGQWDICLIDCPPSLGMLTLNALIAAESLIVPLQCEFFALEGLSQ LLTTVERVRERFNQKLSILGVALTMFDRRNRLTDQVSDDVREVLGPVVFDTVIPRNVRLSEAPSHGLPALIYDHRCAGSA AYIALAREMIDRLPEIRKAA
Sequences:
>Translated_260_residues MIRIAVANQKGGVGKTTTAINLATALAATGWRTLIIDLDPQGNASTGLGIKQSQRECSSYELLRGDAGVAECAIPTAVPR LDIVSATVDLSGAEIELIEYQDRLHRLQKALSGAEAGQWDICLIDCPPSLGMLTLNALIAAESLIVPLQCEFFALEGLSQ LLTTVERVRERFNQKLSILGVALTMFDRRNRLTDQVSDDVREVLGPVVFDTVIPRNVRLSEAPSHGLPALIYDHRCAGSA AYIALAREMIDRLPEIRKAA >Mature_260_residues MIRIAVANQKGGVGKTTTAINLATALAATGWRTLIIDLDPQGNASTGLGIKQSQRECSSYELLRGDAGVAECAIPTAVPR LDIVSATVDLSGAEIELIEYQDRLHRLQKALSGAEAGQWDICLIDCPPSLGMLTLNALIAAESLIVPLQCEFFALEGLSQ LLTTVERVRERFNQKLSILGVALTMFDRRNRLTDQVSDDVREVLGPVVFDTVIPRNVRLSEAPSHGLPALIYDHRCAGSA AYIALAREMIDRLPEIRKAA
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28145; Mature: 28145
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIAVANQKGGVGKTTTAINLATALAATGWRTLIIDLDPQGNASTGLGIKQSQRECSSY CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH ELLRGDAGVAECAIPTAVPRLDIVSATVDLSGAEIELIEYQDRLHRLQKALSGAEAGQWD HHHCCCCCCHHHCCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCC ICLIDCPPSLGMLTLNALIAAESLIVPLQCEFFALEGLSQLLTTVERVRERFNQKLSILG EEEEECCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VALTMFDRRNRLTDQVSDDVREVLGPVVFDTVIPRNVRLSEAPSHGLPALIYDHRCAGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEECCCCCCHH AYIALAREMIDRLPEIRKAA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRIAVANQKGGVGKTTTAINLATALAATGWRTLIIDLDPQGNASTGLGIKQSQRECSSY CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH ELLRGDAGVAECAIPTAVPRLDIVSATVDLSGAEIELIEYQDRLHRLQKALSGAEAGQWD HHHCCCCCCHHHCCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCC ICLIDCPPSLGMLTLNALIAAESLIVPLQCEFFALEGLSQLLTTVERVRERFNQKLSILG EEEEECCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VALTMFDRRNRLTDQVSDDVREVLGPVVFDTVIPRNVRLSEAPSHGLPALIYDHRCAGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEECCCCCCHH AYIALAREMIDRLPEIRKAA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9054507 [H]