| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is rsmG
Identifier: 103488332
GI number: 103488332
Start: 3004996
End: 3005697
Strand: Direct
Name: rsmG
Synonym: Sala_2855
Alternate gene names: 103488332
Gene position: 3004996-3005697 (Clockwise)
Preceding gene: 103488331
Following gene: 103488333
Centisome position: 89.83
GC content: 64.67
Gene sequence:
>702_bases ATGATAATCCCGCATCGTGCGGATGGTGGAAAGAACGATGTGAGCGCTGCCGAACTCTTGAAGGATGAACGCGCTGCACG CGGCTGGCTGACGCAGGCGTTTGCGCCTTCGACCGAACAATGGGCGCAGATCGAGCGCTTTGTCACGATGCTGATTGCCG AGAATGCGAAGCAGAATCTGATCGCCGCGTCGACGATCCCGGCCATCTGGGCGCGGCATATTGCCGACAGCGCGCAGTTG CTGGCGCTCGATACGCGTGAGGGCGAGGGACTCTGGATCGACCTGGGCAGCGGGCCGGGGCTTCCGGGCCTTGTCGTCGC GATTCTGTCGGAGCGGCCGATGCTGCTCGTCGAATCGCGGCGCCGCCGCTGCGATTTCCTGCGCGCGGTTGTGGCCGAGC TGGCGCTGGACCATGTCGAGGTCGCCGAGGCGCCGCTCGAGCGCGTGGCAACGCGCCCGGCGGCGACGATCAGCGCGCGC GCCTTTGCTCCGCTCGACCGGCTCATCGACTTATCCGCGCGTTTTTCCACCGAATCGACGCGCTGGCTGCTGCCAAAGGG GCGAAATGCGGTTAAGGAACTGGCGTTGCTGCCCGAGCCATGGCAGAGAATGTTTCACGTGGAACAGAGCCGCACCGACG CCGAAAGCGGCATTTTGGTCGGCACGGGGCGTATCGCGCCGAAAAAGCGAGGGAAAGCATGA
Upstream 100 bases:
>100_bases GCGCTGACGGCGATCATGGTGCATAGCCGGCGGCGCGCGGCCTGAATCGGCGAAGACAGGTTCTGGAATCTCACGCAAAG GCGCAAAGGCGCGAAGAAGG
Downstream 100 bases:
>100_bases TCCGCATTGCCGTGGCAAACCAGAAGGGGGGGGTCGGCAAGACGACGACTGCGATCAATCTGGCGACCGCGCTCGCGGCG ACGGGCTGGCGGACGCTGAT
Product: methyltransferase GidB
Products: NA
Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIIPHRADGGKNDVSAAELLKDERAARGWLTQAFAPSTEQWAQIERFVTMLIAENAKQNLIAASTIPAIWARHIADSAQL LALDTREGEGLWIDLGSGPGLPGLVVAILSERPMLLVESRRRRCDFLRAVVAELALDHVEVAEAPLERVATRPAATISAR AFAPLDRLIDLSARFSTESTRWLLPKGRNAVKELALLPEPWQRMFHVEQSRTDAESGILVGTGRIAPKKRGKA
Sequences:
>Translated_233_residues MIIPHRADGGKNDVSAAELLKDERAARGWLTQAFAPSTEQWAQIERFVTMLIAENAKQNLIAASTIPAIWARHIADSAQL LALDTREGEGLWIDLGSGPGLPGLVVAILSERPMLLVESRRRRCDFLRAVVAELALDHVEVAEAPLERVATRPAATISAR AFAPLDRLIDLSARFSTESTRWLLPKGRNAVKELALLPEPWQRMFHVEQSRTDAESGILVGTGRIAPKKRGKA >Mature_233_residues MIIPHRADGGKNDVSAAELLKDERAARGWLTQAFAPSTEQWAQIERFVTMLIAENAKQNLIAASTIPAIWARHIADSAQL LALDTREGEGLWIDLGSGPGLPGLVVAILSERPMLLVESRRRRCDFLRAVVAELALDHVEVAEAPLERVATRPAATISAR AFAPLDRLIDLSARFSTESTRWLLPKGRNAVKELALLPEPWQRMFHVEQSRTDAESGILVGTGRIAPKKRGKA
Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA
COG id: COG0357
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family
Homologues:
Organism=Escherichia coli, GI1790179, Length=168, Percent_Identity=32.7380952380952, Blast_Score=81, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RSMG_SPHAL (Q1GP62)
Other databases:
- EMBL: CP000356 - RefSeq: YP_617893.1 - ProteinModelPortal: Q1GP62 - SMR: Q1GP62 - GeneID: 4080648 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_2855 - NMPDR: fig|317655.9.peg.2718 - HOGENOM: HBG686577 - OMA: MFHVEQS - BioCyc: SALA317655:SALA_2855-MONOMER - GO: GO:0005737 - HAMAP: MF_00074 - InterPro: IPR003682 - PIRSF: PIRSF003078 - TIGRFAMs: TIGR00138
Pfam domain/function: PF02527 GidB
EC number: =2.1.1.170
Molecular weight: Translated: 25591; Mature: 25591
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPHRADGGKNDVSAAELLKDERAARGWLTQAFAPSTEQWAQIERFVTMLIAENAKQNL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCE IAASTIPAIWARHIADSAQLLALDTREGEGLWIDLGSGPGLPGLVVAILSERPMLLVESR EHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHH RRRCDFLRAVVAELALDHVEVAEAPLERVATRPAATISARAFAPLDRLIDLSARFSTEST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC RWLLPKGRNAVKELALLPEPWQRMFHVEQSRTDAESGILVGTGRIAPKKRGKA EEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MIIPHRADGGKNDVSAAELLKDERAARGWLTQAFAPSTEQWAQIERFVTMLIAENAKQNL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCE IAASTIPAIWARHIADSAQLLALDTREGEGLWIDLGSGPGLPGLVVAILSERPMLLVESR EHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHH RRRCDFLRAVVAELALDHVEVAEAPLERVATRPAATISARAFAPLDRLIDLSARFSTEST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC RWLLPKGRNAVKELALLPEPWQRMFHVEQSRTDAESGILVGTGRIAPKKRGKA EEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA