| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488324
Identifier: 103488324
GI number: 103488324
Start: 2999079
End: 2999324
Strand: Direct
Name: 103488324
Synonym: Sala_2847
Alternate gene names: NA
Gene position: 2999079-2999324 (Clockwise)
Preceding gene: 103488323
Following gene: 103488325
Centisome position: 89.65
GC content: 48.78
Gene sequence:
>246_bases ATGGACCAGCTACAAGCCGAGGTTGATCGCAATTACGATTGGTTTCAGCGTAACTTGAAAACTTTCCTTGTCGATCATGA TGGGGATTATGCAGTGTTGCGTGGCGAAGCGGTGCAGGGATTTTATCAATCGCCCGGCGAGGCATTGCGGACTGCACTCG CTCAGTTTCCCGATCGAATTTTTTCGATTCAGCAAGTCGTCGATGAACCTCTCGATTTAGGATTTCTATCGCTTGCCGTC GATTGA
Upstream 100 bases:
>100_bases TTCGGTCACAGTTTGACTCAAAATGGATTCGGTTCACCGATTGAGGGATTCTCTTTCCGCAAATTTGTGAGAGTATCCTC CAGTCGGAGGAGGTCGGTTC
Downstream 100 bases:
>100_bases GGGTCGACACGACGGGCGACGCATCGTCACCGATGTTGCGGTGTTAGCCGCGGAAAATCCGGCGGACCTCAGCCATGTGA TCGGTCGAGCGCTGATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MDQLQAEVDRNYDWFQRNLKTFLVDHDGDYAVLRGEAVQGFYQSPGEALRTALAQFPDRIFSIQQVVDEPLDLGFLSLAV D
Sequences:
>Translated_81_residues MDQLQAEVDRNYDWFQRNLKTFLVDHDGDYAVLRGEAVQGFYQSPGEALRTALAQFPDRIFSIQQVVDEPLDLGFLSLAV D >Mature_81_residues MDQLQAEVDRNYDWFQRNLKTFLVDHDGDYAVLRGEAVQGFYQSPGEALRTALAQFPDRIFSIQQVVDEPLDLGFLSLAV D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9264; Mature: 9264
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQLQAEVDRNYDWFQRNLKTFLVDHDGDYAVLRGEAVQGFYQSPGEALRTALAQFPDRI CCCCHHHHCCCHHHHHHHHHHEEEECCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHH FSIQQVVDEPLDLGFLSLAVD HHHHHHHCCCCCCCHHEEECC >Mature Secondary Structure MDQLQAEVDRNYDWFQRNLKTFLVDHDGDYAVLRGEAVQGFYQSPGEALRTALAQFPDRI CCCCHHHHCCCHHHHHHHHHHEEEECCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHH FSIQQVVDEPLDLGFLSLAVD HHHHHHHCCCCCCCHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA