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The map label for this gene is yezE [H]

Identifier: 103488169

GI number: 103488169

Start: 2834379

End: 2834960

Strand: Direct

Name: yezE [H]

Synonym: Sala_2692

Alternate gene names: 103488169

Gene position: 2834379-2834960 (Clockwise)

Preceding gene: 103488168

Following gene: 103488170

Centisome position: 84.73

GC content: 63.75

Gene sequence:

>582_bases
ATGCCATGGGAAAAGCGATTCGATGTCGGCGAGACGCTGACGCGTGCGATGCACGCATTCTGGACGCGCGGCTATGAGGC
GACATCGATGCAGGATCTCGTGGCCGCGACGGGTGTCAACCGGGCGAGCCTTTATGCGACCTATGGCGACAAGCGCGAAT
TGTTCCTCGCCGCGCTCCGCAAATATGACGGCGAGGTCCGCGGCCACACGCTGCAGGAGCTTGCGCGCGTCCATGCGCCG
GCCGATGCGATCGGTGCGCTGTTCGATAAATTCATCGCCCAGACGGCGGTGCCCGGCCAGAACTGGGGTTGTTTCCTCAT
CAACACCGCGCTTGAACTCGCGGCGCACGACGCGGAGATCGCCGAGCTGGTCAATGCGGCGCAGGACGACATCGAAGCCT
TTTTTCTCGCGATGATCCGCAAGGGCCAGGCGAGCGGAGCGTTCAACCGCGAACGCGATGCGGCGCTGCTCGCGCACCAG
GCGCTCGCTTCCTTGCTCGGCATGCTCGTGATGATCCGCAGTCGCCCTGAACGAAAATATCTCGATGCCGTCCGCGACGG
CGTCCTTCGTTCGCTCGGCTGA

Upstream 100 bases:

>100_bases
CCAACCCCGAATATCGCTAGGGTGCGGACACTGGCCGTGCATGAAGCGCTCGCCCCAGCGCAGTATTGACCGATCGTTCC
AAACAATCTAGGACGGCGAC

Downstream 100 bases:

>100_bases
ACCCCTTTTTTGCGCAGTATGGAATGATTGTTCCATACAATAGAAAGGAAAGACATATGCCCCTCGTCCAGATTGGCGGC
GTCGGCGACTATCTGACGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MPWEKRFDVGETLTRAMHAFWTRGYEATSMQDLVAATGVNRASLYATYGDKRELFLAALRKYDGEVRGHTLQELARVHAP
ADAIGALFDKFIAQTAVPGQNWGCFLINTALELAAHDAEIAELVNAAQDDIEAFFLAMIRKGQASGAFNRERDAALLAHQ
ALASLLGMLVMIRSRPERKYLDAVRDGVLRSLG

Sequences:

>Translated_193_residues
MPWEKRFDVGETLTRAMHAFWTRGYEATSMQDLVAATGVNRASLYATYGDKRELFLAALRKYDGEVRGHTLQELARVHAP
ADAIGALFDKFIAQTAVPGQNWGCFLINTALELAAHDAEIAELVNAAQDDIEAFFLAMIRKGQASGAFNRERDAALLAHQ
ALASLLGMLVMIRSRPERKYLDAVRDGVLRSLG
>Mature_192_residues
PWEKRFDVGETLTRAMHAFWTRGYEATSMQDLVAATGVNRASLYATYGDKRELFLAALRKYDGEVRGHTLQELARVHAPA
DAIGALFDKFIAQTAVPGQNWGCFLINTALELAAHDAEIAELVNAAQDDIEAFFLAMIRKGQASGAFNRERDAALLAHQA
LASLLGMLVMIRSRPERKYLDAVRDGVLRSLG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081833, Length=174, Percent_Identity=32.7586206896552, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21311; Mature: 21179

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWEKRFDVGETLTRAMHAFWTRGYEATSMQDLVAATGVNRASLYATYGDKRELFLAALR
CCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHH
KYDGEVRGHTLQELARVHAPADAIGALFDKFIAQTAVPGQNWGCFLINTALELAAHDAEI
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AELVNAAQDDIEAFFLAMIRKGQASGAFNRERDAALLAHQALASLLGMLVMIRSRPERKY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LDAVRDGVLRSLG
HHHHHHHHHHHCC
>Mature Secondary Structure 
PWEKRFDVGETLTRAMHAFWTRGYEATSMQDLVAATGVNRASLYATYGDKRELFLAALR
CCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHH
KYDGEVRGHTLQELARVHAPADAIGALFDKFIAQTAVPGQNWGCFLINTALELAAHDAEI
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AELVNAAQDDIEAFFLAMIRKGQASGAFNRERDAALLAHQALASLLGMLVMIRSRPERKY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LDAVRDGVLRSLG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]