Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488073

Identifier: 103488073

GI number: 103488073

Start: 2735177

End: 2736109

Strand: Direct

Name: 103488073

Synonym: Sala_2595

Alternate gene names: NA

Gene position: 2735177-2736109 (Clockwise)

Preceding gene: 103488070

Following gene: 103488074

Centisome position: 81.76

GC content: 58.31

Gene sequence:

>933_bases
ATGCGCACCGGCCTCGATCATCTTCCGGCACAGAAACGACGCGAAATCGAGCGGGTCGTGCAGATCATCTTCGAGGAGTT
CGACGATGCGCTGGCGCTCGCCACGCATCAGTGGAAGAAGAAGGGCAGGATCGAGAAGATCATTCTCTACGGCAGCTATG
CGCGCGGCGGCTGGGTCGATGAACCGCATACGGCCAAAGGCTACCAGTCGGATTTCGACCTGCTCATCATCGTCAACGAC
AAAAGGCTGACCGATCGGGTCGATTATTGGCTGAAGCTGGAGGATCGGCTCAACCGCGAGCTGTCGATCACGAAGACACT
CAAGACGCCGGTCAATTTCATCGTCCACACGCTCCAGGAAGTGAATGATGGCCTGGCGCACGGCCGCTACTTCTTCATGG
ATGTCGCACGCGACGGCATCGCGCTCTACCAGTTCGAGGACGGCGAGCTTCACAAGCCAAAGCCTAAGACGCCCGAACAG
GCGTTGGCAATGGCGAAGGAATATTTTGACGAGTGGATGCCTGCTGCATCAGGTATGCTCGAAACCGCGAAGTTCAGCCA
AAAGCAGGGGCGATTGAAGGATGCGGCGTTCTTGATGCACCAAGCGACGGAGCGTCTTTATCACTGCGTCCTCCTAGTCG
TGACTTTCTATACGCCACACGTCCACAACATCGGCTTCCTGCGCACTCAGGCGGAACGTCTCGACCTTCGGCTGGTCGAT
GCCTGGCCGCGCGAACGAAAGGTCGACCGAACACTCTTCGAGAAGCTCAAGGAAGCCTATGTGAAGGCCCGCTATTCGAA
GCACTACCGGATCAGCACCGAGCAACTCGAATGGCTCGCAGCGCGCGTCGAGGAACTGGGCACCATCGTTCACACGATCT
GCACCGAACGCCTCACCGCCCTCGAACAGGACGTCGCGCGGGAGGGATCGTAA

Upstream 100 bases:

>100_bases
CTTTATGCCACAAATCTCCAGCCGTGTCGCGATTCATTTTTTGAGACACGATCGGCGTTTCATGGGTGCAAAGCGACCCA
TGTGCTGTTAGGCTATCCCA

Downstream 100 bases:

>100_bases
CCCTCCGGGGCCGGGACGCGCACGGCCCGGTCGCCGCGAATGCGGCGATAGAGCCCGACGGCCGCAAGGCCGTCCCGCCC
CAAGCGATCTGCATGGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Nucleotidyltransferase Protein; DNA Polymerase Beta Domain Protein Region; HEPN Domain-Containing Protein; Hepn Domain Protein; Nucleotidyltransferase/HEPN Domain-Containing Protein; Xin-Antitoxin System Toxin Component; HEPN Domain Protein; DNA Polymerase Beta Subunit; Nucleotidyltransferase Domain-Containing Protein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRTGLDHLPAQKRREIERVVQIIFEEFDDALALATHQWKKKGRIEKIILYGSYARGGWVDEPHTAKGYQSDFDLLIIVND
KRLTDRVDYWLKLEDRLNRELSITKTLKTPVNFIVHTLQEVNDGLAHGRYFFMDVARDGIALYQFEDGELHKPKPKTPEQ
ALAMAKEYFDEWMPAASGMLETAKFSQKQGRLKDAAFLMHQATERLYHCVLLVVTFYTPHVHNIGFLRTQAERLDLRLVD
AWPRERKVDRTLFEKLKEAYVKARYSKHYRISTEQLEWLAARVEELGTIVHTICTERLTALEQDVAREGS

Sequences:

>Translated_310_residues
MRTGLDHLPAQKRREIERVVQIIFEEFDDALALATHQWKKKGRIEKIILYGSYARGGWVDEPHTAKGYQSDFDLLIIVND
KRLTDRVDYWLKLEDRLNRELSITKTLKTPVNFIVHTLQEVNDGLAHGRYFFMDVARDGIALYQFEDGELHKPKPKTPEQ
ALAMAKEYFDEWMPAASGMLETAKFSQKQGRLKDAAFLMHQATERLYHCVLLVVTFYTPHVHNIGFLRTQAERLDLRLVD
AWPRERKVDRTLFEKLKEAYVKARYSKHYRISTEQLEWLAARVEELGTIVHTICTERLTALEQDVAREGS
>Mature_310_residues
MRTGLDHLPAQKRREIERVVQIIFEEFDDALALATHQWKKKGRIEKIILYGSYARGGWVDEPHTAKGYQSDFDLLIIVND
KRLTDRVDYWLKLEDRLNRELSITKTLKTPVNFIVHTLQEVNDGLAHGRYFFMDVARDGIALYQFEDGELHKPKPKTPEQ
ALAMAKEYFDEWMPAASGMLETAKFSQKQGRLKDAAFLMHQATERLYHCVLLVVTFYTPHVHNIGFLRTQAERLDLRLVD
AWPRERKVDRTLFEKLKEAYVKARYSKHYRISTEQLEWLAARVEELGTIVHTICTERLTALEQDVAREGS

Specific function: Unknown

COG id: COG1708

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36233; Mature: 36233

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGLDHLPAQKRREIERVVQIIFEEFDDALALATHQWKKKGRIEKIILYGSYARGGWVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC
EPHTAKGYQSDFDLLIIVNDKRLTDRVDYWLKLEDRLNRELSITKTLKTPVNFIVHTLQE
CCCCCCCCCCCCEEEEEECCCHHHHHHHHHEEEHHHCCCCEEHHHHHHHHHHHHHHHHHH
VNDGLAHGRYFFMDVARDGIALYQFEDGELHKPKPKTPEQALAMAKEYFDEWMPAASGML
HHHHHHCCHHEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ETAKFSQKQGRLKDAAFLMHQATERLYHCVLLVVTFYTPHVHNIGFLRTQAERLDLRLVD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEC
AWPRERKVDRTLFEKLKEAYVKARYSKHYRISTEQLEWLAARVEELGTIVHTICTERLTA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQDVAREGS
HHHHHHCCCC
>Mature Secondary Structure
MRTGLDHLPAQKRREIERVVQIIFEEFDDALALATHQWKKKGRIEKIILYGSYARGGWVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC
EPHTAKGYQSDFDLLIIVNDKRLTDRVDYWLKLEDRLNRELSITKTLKTPVNFIVHTLQE
CCCCCCCCCCCCEEEEEECCCHHHHHHHHHEEEHHHCCCCEEHHHHHHHHHHHHHHHHHH
VNDGLAHGRYFFMDVARDGIALYQFEDGELHKPKPKTPEQALAMAKEYFDEWMPAASGML
HHHHHHCCHHEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ETAKFSQKQGRLKDAAFLMHQATERLYHCVLLVVTFYTPHVHNIGFLRTQAERLDLRLVD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEC
AWPRERKVDRTLFEKLKEAYVKARYSKHYRISTEQLEWLAARVEELGTIVHTICTERLTA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQDVAREGS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA