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The map label for this gene is bepC [H]

Identifier: 103488061

GI number: 103488061

Start: 2726304

End: 2727797

Strand: Direct

Name: bepC [H]

Synonym: Sala_2583

Alternate gene names: 103488061

Gene position: 2726304-2727797 (Clockwise)

Preceding gene: 103488060

Following gene: 103488062

Centisome position: 81.5

GC content: 64.73

Gene sequence:

>1494_bases
ATGAGCAATCGCTTCCCGACATGGATCTTTGCCGTACTGCCCTTGCTCGCGAGCAGCGCCGCCCATGGCGAGACCTTGCG
GCAGGCATTGATCTATGCCTATCGCACCAACCCGAGCCTGACGGCGGCAAGGGCAGGCCTCCGGGCGACCGATGAAGGCG
TGCCCATCGCCAAGGCCGCCGGACGCCCGACACTGAGCGCGACCGCTGACTATCAGGAATTTGTTGTGCGATCCGCCAAC
AGTTTCTCCGCTCCCTTGCGGGCGGCTAATGCAAACGCGAACCTGTCGTTTCCCCTCTACCAGGGCGGCCGCGTCAAGAA
TTCGATTCGCGCCGCCGATGCCCGCGTGGAATCCGGGCGGGCGAATTTGCGCTTCACGGAAGCCGATGTCTTCACGGCCA
TCGTCTCGGTCTACATGGATGTCATGCGTGACGACGCGATCGTCGGACTCAACCGCCAGAACGTCGCCGTCCTCGAGACG
AACCTCCAGGCTTCACGAGACCGCTTCGAAGTGGGAGACCTGACCCGTACCGATGTCGCCCAGTCCGAGGCGCGTCTCGC
AGTGGCGCGAGGGCAGCTGGAGACGGCGCTGGCGCAGCTCGACACCAGCCTTGAGAATTATCTCCGCTTCGTCGGTTTGC
CGGCGCGCGATCTCGAGCAGCCGCCGGCGTTGCCAGGCCTACCCAAGTCGCCCGCCGAGGCTGTGGCGATTGCCATCGAG
AACAACCCTCAGCTCCTCGCAGCCAAGGCCGATGCGAGAGCCGCACGCTACGACGTCCGCGTGGCGGGCGCATCGCGCCT
GCCTACGCTCTCGGTGGTGGGCAATGGCGGCTATAACAATTATCTGGGCACGCTCACCAGCACTCTTCCGGGGCGCGTGT
TCCAGCAGGCGCAGACCACGGCGACGGTCGGACTATCCGCAACGATCCCGCTTTACCAGGGCGGCCTCCCTGCGGCGCAA
GTGCGACGCGCCACCGCGATCGAGAGCCAGGCGCTCGAGCAGATCATATTCATCGAGCGCCGCGTCGTCGCGGAAGCGCG
CGCCGCCTATTCGCGCTATCAGGCGACCCAGGCCGTGATCCAATCATCGAAAGCGGCGATCGCGGCAAATGAGCTGGCCC
TCGAAGGTGTACGGGCCGAGAACAGCGTTGGCACACGCAATGTCCTCGACGTGCTCAACGCCGAACAGGAGCTTCTCAAC
AGCCGCGTGCAGCTCGTGACCGCCGAGCGCGACGCCTATGTCGCAGGCTTCACGCTTCTCGCGGCAATGGGCCGAGCCGA
AGCGCGCGATCTCAACCTCTTTGGCGGCACGTTGTTTGAGCCGGGCTTCAGCCGCAAGGCGCCGTCCGGCCGCCTGCCCT
CCGAAATGGATTTCGATTCTGCTCCTGACAGCAACATCGAATTTGTCCCGGCGACACCAGTTCAATTCCTCGAAGGGGGT
ATGCGGCCGGCGCCACGGGAGCCGCTCGCATCCAATACGGGAGCCAGACCATGA

Upstream 100 bases:

>100_bases
TCGGGATAGGTCCGGCGGTCGTGGCTCACGAAGGCTCGACGCTGCTCGTGGTTTTCAATGCGCTTCGGCTGCTGGCCTAT
CGGGACAACGGGGGTGCCCA

Downstream 100 bases:

>100_bases
AGAATTCTGCCTCGTCCATCACGGCTCGGCCTGAGACGCGATTGGGGGAATGCACGAGTGCTGTCAAACAGCTCAAGGTC
TCTCTGAAGACAGTCACTCG

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSNRFPTWIFAVLPLLASSAAHGETLRQALIYAYRTNPSLTAARAGLRATDEGVPIAKAAGRPTLSATADYQEFVVRSAN
SFSAPLRAANANANLSFPLYQGGRVKNSIRAADARVESGRANLRFTEADVFTAIVSVYMDVMRDDAIVGLNRQNVAVLET
NLQASRDRFEVGDLTRTDVAQSEARLAVARGQLETALAQLDTSLENYLRFVGLPARDLEQPPALPGLPKSPAEAVAIAIE
NNPQLLAAKADARAARYDVRVAGASRLPTLSVVGNGGYNNYLGTLTSTLPGRVFQQAQTTATVGLSATIPLYQGGLPAAQ
VRRATAIESQALEQIIFIERRVVAEARAAYSRYQATQAVIQSSKAAIAANELALEGVRAENSVGTRNVLDVLNAEQELLN
SRVQLVTAERDAYVAGFTLLAAMGRAEARDLNLFGGTLFEPGFSRKAPSGRLPSEMDFDSAPDSNIEFVPATPVQFLEGG
MRPAPREPLASNTGARP

Sequences:

>Translated_497_residues
MSNRFPTWIFAVLPLLASSAAHGETLRQALIYAYRTNPSLTAARAGLRATDEGVPIAKAAGRPTLSATADYQEFVVRSAN
SFSAPLRAANANANLSFPLYQGGRVKNSIRAADARVESGRANLRFTEADVFTAIVSVYMDVMRDDAIVGLNRQNVAVLET
NLQASRDRFEVGDLTRTDVAQSEARLAVARGQLETALAQLDTSLENYLRFVGLPARDLEQPPALPGLPKSPAEAVAIAIE
NNPQLLAAKADARAARYDVRVAGASRLPTLSVVGNGGYNNYLGTLTSTLPGRVFQQAQTTATVGLSATIPLYQGGLPAAQ
VRRATAIESQALEQIIFIERRVVAEARAAYSRYQATQAVIQSSKAAIAANELALEGVRAENSVGTRNVLDVLNAEQELLN
SRVQLVTAERDAYVAGFTLLAAMGRAEARDLNLFGGTLFEPGFSRKAPSGRLPSEMDFDSAPDSNIEFVPATPVQFLEGG
MRPAPREPLASNTGARP
>Mature_496_residues
SNRFPTWIFAVLPLLASSAAHGETLRQALIYAYRTNPSLTAARAGLRATDEGVPIAKAAGRPTLSATADYQEFVVRSANS
FSAPLRAANANANLSFPLYQGGRVKNSIRAADARVESGRANLRFTEADVFTAIVSVYMDVMRDDAIVGLNRQNVAVLETN
LQASRDRFEVGDLTRTDVAQSEARLAVARGQLETALAQLDTSLENYLRFVGLPARDLEQPPALPGLPKSPAEAVAIAIEN
NPQLLAAKADARAARYDVRVAGASRLPTLSVVGNGGYNNYLGTLTSTLPGRVFQQAQTTATVGLSATIPLYQGGLPAAQV
RRATAIESQALEQIIFIERRVVAEARAAYSRYQATQAVIQSSKAAIAANELALEGVRAENSVGTRNVLDVLNAEQELLNS
RVQLVTAERDAYVAGFTLLAAMGRAEARDLNLFGGTLFEPGFSRKAPSGRLPSEMDFDSAPDSNIEFVPATPVQFLEGGM
RPAPREPLASNTGARP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=440, Percent_Identity=26.8181818181818, Blast_Score=99, Evalue=7e-22,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53084; Mature: 52953

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRFPTWIFAVLPLLASSAAHGETLRQALIYAYRTNPSLTAARAGLRATDEGVPIAKAA
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHCC
GRPTLSATADYQEFVVRSANSFSAPLRAANANANLSFPLYQGGRVKNSIRAADARVESGR
CCCCCCCCCCHHHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC
ANLRFTEADVFTAIVSVYMDVMRDDAIVGLNRQNVAVLETNLQASRDRFEVGDLTRTDVA
CCEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCHHCCCCCCCCCCCHHHHH
QSEARLAVARGQLETALAQLDTSLENYLRFVGLPARDLEQPPALPGLPKSPAEAVAIAIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEEC
NNPQLLAAKADARAARYDVRVAGASRLPTLSVVGNGGYNNYLGTLTSTLPGRVFQQAQTT
CCCCEEEECCCCCHHHEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHH
ATVGLSATIPLYQGGLPAAQVRRATAIESQALEQIIFIERRVVAEARAAYSRYQATQAVI
EEECCEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSSKAAIAANELALEGVRAENSVGTRNVLDVLNAEQELLNSRVQLVTAERDAYVAGFTLL
HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
AAMGRAEARDLNLFGGTLFEPGFSRKAPSGRLPSEMDFDSAPDSNIEFVPATPVQFLEGG
HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCC
MRPAPREPLASNTGARP
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNRFPTWIFAVLPLLASSAAHGETLRQALIYAYRTNPSLTAARAGLRATDEGVPIAKAA
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHCC
GRPTLSATADYQEFVVRSANSFSAPLRAANANANLSFPLYQGGRVKNSIRAADARVESGR
CCCCCCCCCCHHHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC
ANLRFTEADVFTAIVSVYMDVMRDDAIVGLNRQNVAVLETNLQASRDRFEVGDLTRTDVA
CCEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCHHCCCCCCCCCCCHHHHH
QSEARLAVARGQLETALAQLDTSLENYLRFVGLPARDLEQPPALPGLPKSPAEAVAIAIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEEC
NNPQLLAAKADARAARYDVRVAGASRLPTLSVVGNGGYNNYLGTLTSTLPGRVFQQAQTT
CCCCEEEECCCCCHHHEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHH
ATVGLSATIPLYQGGLPAAQVRRATAIESQALEQIIFIERRVVAEARAAYSRYQATQAVI
EEECCEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSSKAAIAANELALEGVRAENSVGTRNVLDVLNAEQELLNSRVQLVTAERDAYVAGFTLL
HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
AAMGRAEARDLNLFGGTLFEPGFSRKAPSGRLPSEMDFDSAPDSNIEFVPATPVQFLEGG
HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCC
MRPAPREPLASNTGARP
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]