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The map label for this gene is cypC [H]

Identifier: 103488034

GI number: 103488034

Start: 2696453

End: 2697739

Strand: Direct

Name: cypC [H]

Synonym: Sala_2556

Alternate gene names: 103488034

Gene position: 2696453-2697739 (Clockwise)

Preceding gene: 103488033

Following gene: 103488037

Centisome position: 80.61

GC content: 61.54

Gene sequence:

>1287_bases
ATGTCCCGGATTCCGCGTGACAAAAGCCTGGACTCGACGATCGCCCTGATGGGTGATCCCTACAGATTTATTTCGAACCG
GTGTCGACGCTACCGATCGGACCTGTTCGAAACGCGGCTTCTGCTGCGGAAGACCATCTGTATGACGGGGCCTGAAGCGG
CCCGGCTGTTCTACGACCAGAGCCGCTTCGCGCGCCACGGCGCCATGCCTAAGGCGATTCAGAAGACACTGCTCGGAGTG
GGTGGCGTACAGGGCCTCGACGAGGGAGCTCACCGGCACCGCAAGCAGATGTTCATGTCGCTGATGACACCCGAGGGGAT
TGAAAAGCTCGTGCGGCTGACCTCGGCGGAGTGGCAGATCCGCGTGCGCAAATGGGCGTCAATGAACGCGGTCGTGCTCT
ATCCGGAGCTTCACGCGCTTCTTACGCGCGCGGCATGCGCTTGGGCCGGCGTGCCGCTGGCGGATTCAGAGGTCGAGCCG
CGAACCCGGCAGGTCACCGCACTGTTTGACCATGCGGGTTCGATTGGACTTAGGCATCTCTGGTCGCGGAGGGCCCGGAA
ACGGGCCGACAGCTGGGCGGCGGATATTGTCGAACAGATCCGAAGCGGTCGCCTCCGCGCGCCCGAACACTCGGCCGCCC
ACGTCGTTGCGTGGCATCGGGATTTCAGTGGTGCGCTGCTGACCCCCCAAGTGGCTGCTGTCGAACTGATCAATGTGATC
AGACCGACGGTTGCCGTCTCGGTCTACATGATCTTTGTCGCACATGCACTGCACACACATCCCCAAGTTCGAGAGAAGCT
TCAGGCAGGCGACGAGGACTATGCTGAATGCTTCGTCCAGGAGGTTCGCCGGTACTATCCTTTCTTCCCGGCAGTCGCTG
CACAGACGCGGCTGGCTTTTGAATGGAACGGATACCAATTCCCCGCAGGTCGCCGAATTCTCCTCGATCTGTACGGTACA
AACCAGGATCCCCGAACCTGGGAAAGGCCGGAGGACTTCGAGCCCGAGCGGTTCGGTCGACGGGATGGCAGCCCGTTCAA
TTTCATCCCGCAGGGTGGCGGCGACCACTACTTCGATCATCGCTGTCCTGGCGAATGGATCGCGATCGAGCTCATGAAGC
TGACTGCGGATTTCCTCACGCGACGCATGAGCTACGAGGTGCCGGGACAAGACCTGAGGATCGAATGGTCGCGGCTGCCC
GCGCTGCCGCGAAGCCGCTTCGTGCTCAGTAATGTTAGAGAATGCCAAGAACTGCACCTTCAGCGGACGCGCTGGCGCCG
CCGGTGA

Upstream 100 bases:

>100_bases
TTATGCCGGCTGGGACCGGTTCGTGCTTTAGAGGTCTTGGCCGCGTGGCCGGGCGTTTGCCGCTCGGAGACCGGGGCCGA
ACAGGATTGGGAGAACTGCA

Downstream 100 bases:

>100_bases
TGGGTATGCCGCAAGCCCAATGCCGCTGGCTATTCAACGGTCCATACGGGAAAACTGCAGATCAGTCTCACAAGCTGGTG
CTCAATCTTACAATAACAAG

Product: fatty acid alpha hydroxylase, cytochrome P450

Products: NA

Alternate protein names: Cytochrome P450BsBeta; Fatty acid beta-hydroxylase [H]

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSRIPRDKSLDSTIALMGDPYRFISNRCRRYRSDLFETRLLLRKTICMTGPEAARLFYDQSRFARHGAMPKAIQKTLLGV
GGVQGLDEGAHRHRKQMFMSLMTPEGIEKLVRLTSAEWQIRVRKWASMNAVVLYPELHALLTRAACAWAGVPLADSEVEP
RTRQVTALFDHAGSIGLRHLWSRRARKRADSWAADIVEQIRSGRLRAPEHSAAHVVAWHRDFSGALLTPQVAAVELINVI
RPTVAVSVYMIFVAHALHTHPQVREKLQAGDEDYAECFVQEVRRYYPFFPAVAAQTRLAFEWNGYQFPAGRRILLDLYGT
NQDPRTWERPEDFEPERFGRRDGSPFNFIPQGGGDHYFDHRCPGEWIAIELMKLTADFLTRRMSYEVPGQDLRIEWSRLP
ALPRSRFVLSNVRECQELHLQRTRWRRR

Sequences:

>Translated_428_residues
MSRIPRDKSLDSTIALMGDPYRFISNRCRRYRSDLFETRLLLRKTICMTGPEAARLFYDQSRFARHGAMPKAIQKTLLGV
GGVQGLDEGAHRHRKQMFMSLMTPEGIEKLVRLTSAEWQIRVRKWASMNAVVLYPELHALLTRAACAWAGVPLADSEVEP
RTRQVTALFDHAGSIGLRHLWSRRARKRADSWAADIVEQIRSGRLRAPEHSAAHVVAWHRDFSGALLTPQVAAVELINVI
RPTVAVSVYMIFVAHALHTHPQVREKLQAGDEDYAECFVQEVRRYYPFFPAVAAQTRLAFEWNGYQFPAGRRILLDLYGT
NQDPRTWERPEDFEPERFGRRDGSPFNFIPQGGGDHYFDHRCPGEWIAIELMKLTADFLTRRMSYEVPGQDLRIEWSRLP
ALPRSRFVLSNVRECQELHLQRTRWRRR
>Mature_427_residues
SRIPRDKSLDSTIALMGDPYRFISNRCRRYRSDLFETRLLLRKTICMTGPEAARLFYDQSRFARHGAMPKAIQKTLLGVG
GVQGLDEGAHRHRKQMFMSLMTPEGIEKLVRLTSAEWQIRVRKWASMNAVVLYPELHALLTRAACAWAGVPLADSEVEPR
TRQVTALFDHAGSIGLRHLWSRRARKRADSWAADIVEQIRSGRLRAPEHSAAHVVAWHRDFSGALLTPQVAAVELINVIR
PTVAVSVYMIFVAHALHTHPQVREKLQAGDEDYAECFVQEVRRYYPFFPAVAAQTRLAFEWNGYQFPAGRRILLDLYGTN
QDPRTWERPEDFEPERFGRRDGSPFNFIPQGGGDHYFDHRCPGEWIAIELMKLTADFLTRRMSYEVPGQDLRIEWSRLPA
LPRSRFVLSNVRECQELHLQRTRWRRR

Specific function: Catalyzes the alpha- and beta-hydroxylation of myristic acid in the presence of hydrogen peroxide [H]

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

Organism=Homo sapiens, GI16933533, Length=208, Percent_Identity=25.9615384615385, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4503231, Length=189, Percent_Identity=26.4550264550265, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71990269, Length=205, Percent_Identity=27.3170731707317, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002401 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 49531; Mature: 49400

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIPRDKSLDSTIALMGDPYRFISNRCRRYRSDLFETRLLLRKTICMTGPEAARLFYDQ
CCCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRFARHGAMPKAIQKTLLGVGGVQGLDEGAHRHRKQMFMSLMTPEGIEKLVRLTSAEWQI
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHEE
RVRKWASMNAVVLYPELHALLTRAACAWAGVPLADSEVEPRTRQVTALFDHAGSIGLRHL
EEEHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
WSRRARKRADSWAADIVEQIRSGRLRAPEHSAAHVVAWHRDFSGALLTPQVAAVELINVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
RPTVAVSVYMIFVAHALHTHPQVREKLQAGDEDYAECFVQEVRRYYPFFPAVAAQTRLAF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCEEEE
EWNGYQFPAGRRILLDLYGTNQDPRTWERPEDFEPERFGRRDGSPFNFIPQGGGDHYFDH
EECCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
RCPGEWIAIELMKLTADFLTRRMSYEVPGQDLRIEWSRLPALPRSRFVLSNVRECQELHL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHH
QRTRWRRR
HHHHHCCC
>Mature Secondary Structure 
SRIPRDKSLDSTIALMGDPYRFISNRCRRYRSDLFETRLLLRKTICMTGPEAARLFYDQ
CCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRFARHGAMPKAIQKTLLGVGGVQGLDEGAHRHRKQMFMSLMTPEGIEKLVRLTSAEWQI
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHEE
RVRKWASMNAVVLYPELHALLTRAACAWAGVPLADSEVEPRTRQVTALFDHAGSIGLRHL
EEEHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
WSRRARKRADSWAADIVEQIRSGRLRAPEHSAAHVVAWHRDFSGALLTPQVAAVELINVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
RPTVAVSVYMIFVAHALHTHPQVREKLQAGDEDYAECFVQEVRRYYPFFPAVAAQTRLAF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCEEEE
EWNGYQFPAGRRILLDLYGTNQDPRTWERPEDFEPERFGRRDGSPFNFIPQGGGDHYFDH
EECCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
RCPGEWIAIELMKLTADFLTRRMSYEVPGQDLRIEWSRLPALPRSRFVLSNVRECQELHL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHH
QRTRWRRR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10529095; 9384377; 12519760 [H]