The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488011

Identifier: 103488011

GI number: 103488011

Start: 2669187

End: 2671367

Strand: Direct

Name: 103488011

Synonym: Sala_2532

Alternate gene names: NA

Gene position: 2669187-2671367 (Clockwise)

Preceding gene: 103488010

Following gene: 103488014

Centisome position: 79.79

GC content: 61.71

Gene sequence:

>2181_bases
ATGAAAATCGCACTCCGATCCGGCCTCCCGGCCGTGGCGCTCCTTGCCGCCGCGGCGCTCTCCCCTGCCGCGCAGGCAGG
GGAGAGCAAGGGCAGGCCCTGGACGCTCGAGGATATCCTCACAGTTCCCGAAGTGAATGAAATCGCGCTGTCGGACAATG
GCCGCCTCGCGATTTACGCTGCCGAGATTGCCGACCTCGATGCCGGAAAGCCGAGATCGCATATTCGCATCGTGGACGTC
GAAACTGGTCGGACGAAGGAATTGCTGACGGTCGATACCATCAAGTCGCTGCGATCCGTCCCCGGGACACAAGACTGGAG
CGCTTTGGTAGACCTTGGCGAAGGCCAGCAACTCTACCGGATCGACACCGAGGGCAAGCTGCTGCCACTGATCGTGAACC
CCAACCCCGTGCCGGTGGGAAAGGCCGACATGTCTTTCCCGCTCGGCGGCGGCATACGCCCCTCGCATATCGGTATCCTC
GACTATGACTGGTCACCCGATGGCAAATGGCTTTGGTATTCACAGCTCAGGGCCAAGTCCGACGGACCTCGTGTCCGGTT
CGATGAGGAAGTGACCGCCCTACTTGGCCGGAGACGGTCAACGATCGACGTCGAAGTCGACTTTTTTCTTCGGAATCCTG
AGGGAGACACGACGAGGATCATGGCGCGCCCATCGACAGATCGCGTCGCCACCCGTGGTGGGGGGCGCGTTCTGTGGCGC
GGCAATGAAGTCCAGTTTCGGATCGAGACGAGCGACGGCACTTTGGGCGGTGCCTTCGAATTCGTGGCGTGGAACCGCGT
CAACAGGACGGTGCGCACGCTCGCGAAACAACGCGACTTGCTCAGCATGTCGATTCTCGTCGGCCCGCGCGGTGGGCAGC
TTTCGACAAGCGGTCTGGGCAGCGATCGGGAGTTGATCGAGACCTCGGCAGAAGGTCGACCACACAGCTATGGTCGTGTC
GCATTCGACATCGGCGATTCTCGTTCGGCTGGCTGGAAACGTAGCCGCGATGGCAAACGGGTGGTGATCGGGACCAGGGG
GCTCGGCGACGCGCGCTATGGTCTCGCGCTCATCGATAAAACAGGGGTGCGTGAACTCCGCGCGGACGCGAGCCTTACGC
GATGCGGCTTCGACGGCATGCTCCGGTCTGCCATTTGCGTCGAGGAAGGCATGTCCCGGCCGCCGCGCCTCGTTCGCGTG
GATCTCGGCACAGATAAGATCACAGACCTTGGTCCCATCTCACCAAGACATGAGGAGATCGAACCTCTTCAGACAATTGC
ACGCACCTTTGTCAGTCGCGACGGCTATTGGTCGAGCGGCTATGTCTTGCTCCCGCGCGGCCACCGTGCCGCCGACCGAC
ACCCAGCGGTGGTCGTGACCCACGGCACCGATGCAGACGACCGCTTTGCCGAGCCCGCAAACCAGTGGAACTATCCAGTC
CAGCTGCTTGCTGAACGCGGTTATGTGGTTCTTCTCCTCAACGACCCCTCACCCGGCCAGTCGAAGGATTTGATGGACGC
CATGCACGCCTGGCTACGCGGTAAAGGTCCCCCCGATCCTGAAACGGTTCAACAAAAACTCTGGCTGACCGGCGTGCACA
GCTTCGAGGATGCCGTGACGGAACTTGCCGCCGAGGGGCTGATCGATCCGGCCCGCGTCGGCATCGCCGGCTACAGTCGC
GGCTCCCAAATGGTCAACGTTACCGTGACCAACTCAAAAATGTTTCGCGCGGCCTCGAGCGGCGATGGCGGCTTTCTGGA
ACCCGCCGGCTATGCAACGGGGCGCTCCAGTTATGATGCGGTCTATGGCGGTGCCCCGCTCAGCGACAATATCGAACGCT
GGCGCCGATTTGCGCCGTCGCTGAATGCCGACAAAGTCTGTGCCGCGGTGTTGCAGCAAGTGGCTTCGGCATCGCCGTCA
CAGATCGAACTGTTCGAGGCTTTGCGTGCGGCGGGCGTGGCAACCCAGATCAGCTACTATCCGGGAGCAACAGCGGCGTC
CGACGAGACGCATGTCTTCTACCTGACAACCAACCGATTGCGCGCGATGCGCGAAAACATTGCGTGGTTCGACTATTGGC
TGCTCGACAAGCGGGACGCCGATGCGCCTTTCCCAGATCATGTGGTGAAATGGGATCGCTTGAAGAAGAACTTGCCAGAT
CGCTGCGCCGCCGCGCCTTGA

Upstream 100 bases:

>100_bases
TCGCGTCCGCTAGCGACACGCCTTTCGATACTACCAACTATTCGGCTGTCGGGCGTTTCCTCGGCGTCACGATCAGCCGC
GACTGGTGAGGAGCGCCGAT

Downstream 100 bases:

>100_bases
TCCGTGCTCAATCGTATTCGCCGATTCCTGCGAAGGGTATGTAGCGCGAGCCGGTGTCTTCCTCGACGGGGCCGACCGGT
TCCAAACCGCGCGTCTGCGC

Product: dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein

Products: NA

Alternate protein names: Prolyl Oligopeptidase Family Protein; Peptidase S9 Prolyl Oligopeptidase; Peptidase S9 Prolyl Oligopeptidase Active Site Region; X-Pro Dipeptidyl-Peptidase

Number of amino acids: Translated: 726; Mature: 726

Protein sequence:

>726_residues
MKIALRSGLPAVALLAAAALSPAAQAGESKGRPWTLEDILTVPEVNEIALSDNGRLAIYAAEIADLDAGKPRSHIRIVDV
ETGRTKELLTVDTIKSLRSVPGTQDWSALVDLGEGQQLYRIDTEGKLLPLIVNPNPVPVGKADMSFPLGGGIRPSHIGIL
DYDWSPDGKWLWYSQLRAKSDGPRVRFDEEVTALLGRRRSTIDVEVDFFLRNPEGDTTRIMARPSTDRVATRGGGRVLWR
GNEVQFRIETSDGTLGGAFEFVAWNRVNRTVRTLAKQRDLLSMSILVGPRGGQLSTSGLGSDRELIETSAEGRPHSYGRV
AFDIGDSRSAGWKRSRDGKRVVIGTRGLGDARYGLALIDKTGVRELRADASLTRCGFDGMLRSAICVEEGMSRPPRLVRV
DLGTDKITDLGPISPRHEEIEPLQTIARTFVSRDGYWSSGYVLLPRGHRAADRHPAVVVTHGTDADDRFAEPANQWNYPV
QLLAERGYVVLLLNDPSPGQSKDLMDAMHAWLRGKGPPDPETVQQKLWLTGVHSFEDAVTELAAEGLIDPARVGIAGYSR
GSQMVNVTVTNSKMFRAASSGDGGFLEPAGYATGRSSYDAVYGGAPLSDNIERWRRFAPSLNADKVCAAVLQQVASASPS
QIELFEALRAAGVATQISYYPGATAASDETHVFYLTTNRLRAMRENIAWFDYWLLDKRDADAPFPDHVVKWDRLKKNLPD
RCAAAP

Sequences:

>Translated_726_residues
MKIALRSGLPAVALLAAAALSPAAQAGESKGRPWTLEDILTVPEVNEIALSDNGRLAIYAAEIADLDAGKPRSHIRIVDV
ETGRTKELLTVDTIKSLRSVPGTQDWSALVDLGEGQQLYRIDTEGKLLPLIVNPNPVPVGKADMSFPLGGGIRPSHIGIL
DYDWSPDGKWLWYSQLRAKSDGPRVRFDEEVTALLGRRRSTIDVEVDFFLRNPEGDTTRIMARPSTDRVATRGGGRVLWR
GNEVQFRIETSDGTLGGAFEFVAWNRVNRTVRTLAKQRDLLSMSILVGPRGGQLSTSGLGSDRELIETSAEGRPHSYGRV
AFDIGDSRSAGWKRSRDGKRVVIGTRGLGDARYGLALIDKTGVRELRADASLTRCGFDGMLRSAICVEEGMSRPPRLVRV
DLGTDKITDLGPISPRHEEIEPLQTIARTFVSRDGYWSSGYVLLPRGHRAADRHPAVVVTHGTDADDRFAEPANQWNYPV
QLLAERGYVVLLLNDPSPGQSKDLMDAMHAWLRGKGPPDPETVQQKLWLTGVHSFEDAVTELAAEGLIDPARVGIAGYSR
GSQMVNVTVTNSKMFRAASSGDGGFLEPAGYATGRSSYDAVYGGAPLSDNIERWRRFAPSLNADKVCAAVLQQVASASPS
QIELFEALRAAGVATQISYYPGATAASDETHVFYLTTNRLRAMRENIAWFDYWLLDKRDADAPFPDHVVKWDRLKKNLPD
RCAAAP
>Mature_726_residues
MKIALRSGLPAVALLAAAALSPAAQAGESKGRPWTLEDILTVPEVNEIALSDNGRLAIYAAEIADLDAGKPRSHIRIVDV
ETGRTKELLTVDTIKSLRSVPGTQDWSALVDLGEGQQLYRIDTEGKLLPLIVNPNPVPVGKADMSFPLGGGIRPSHIGIL
DYDWSPDGKWLWYSQLRAKSDGPRVRFDEEVTALLGRRRSTIDVEVDFFLRNPEGDTTRIMARPSTDRVATRGGGRVLWR
GNEVQFRIETSDGTLGGAFEFVAWNRVNRTVRTLAKQRDLLSMSILVGPRGGQLSTSGLGSDRELIETSAEGRPHSYGRV
AFDIGDSRSAGWKRSRDGKRVVIGTRGLGDARYGLALIDKTGVRELRADASLTRCGFDGMLRSAICVEEGMSRPPRLVRV
DLGTDKITDLGPISPRHEEIEPLQTIARTFVSRDGYWSSGYVLLPRGHRAADRHPAVVVTHGTDADDRFAEPANQWNYPV
QLLAERGYVVLLLNDPSPGQSKDLMDAMHAWLRGKGPPDPETVQQKLWLTGVHSFEDAVTELAAEGLIDPARVGIAGYSR
GSQMVNVTVTNSKMFRAASSGDGGFLEPAGYATGRSSYDAVYGGAPLSDNIERWRRFAPSLNADKVCAAVLQQVASASPS
QIELFEALRAAGVATQISYYPGATAASDETHVFYLTTNRLRAMRENIAWFDYWLLDKRDADAPFPDHVVKWDRLKKNLPD
RCAAAP

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79418; Mature: 79418

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIALRSGLPAVALLAAAALSPAAQAGESKGRPWTLEDILTVPEVNEIALSDNGRLAIYA
CEEEECCCCHHHHHHHHHHCCHHHHCCCCCCCCEEHHHHCCCCCCCEEEECCCCEEEEEE
AEIADLDAGKPRSHIRIVDVETGRTKELLTVDTIKSLRSVPGTQDWSALVDLGEGQQLYR
EEECCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCHHHHCCCCCCEEEE
IDTEGKLLPLIVNPNPVPVGKADMSFPLGGGIRPSHIGILDYDWSPDGKWLWYSQLRAKS
ECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHCCC
DGPRVRFDEEVTALLGRRRSTIDVEVDFFLRNPEGDTTRIMARPSTDRVATRGGGRVLWR
CCCCEEECHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCEECCCCEEEEE
GNEVQFRIETSDGTLGGAFEFVAWNRVNRTVRTLAKQRDLLSMSILVGPRGGQLSTSGLG
CCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEECCCCC
SDRELIETSAEGRPHSYGRVAFDIGDSRSAGWKRSRDGKRVVIGTRGLGDARYGLALIDK
CCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECC
TGVRELRADASLTRCGFDGMLRSAICVEEGMSRPPRLVRVDLGTDKITDLGPISPRHEEI
CCHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHH
EPLQTIARTFVSRDGYWSSGYVLLPRGHRAADRHPAVVVTHGTDADDRFAEPANQWNYPV
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHCCCHHCCCCCH
QLLAERGYVVLLLNDPSPGQSKDLMDAMHAWLRGKGPPDPETVQQKLWLTGVHSFEDAVT
HEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
ELAAEGLIDPARVGIAGYSRGSQMVNVTVTNSKMFRAASSGDGGFLEPAGYATGRSSYDA
HHHHHCCCCHHHCCEEECCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCE
VYGGAPLSDNIERWRRFAPSLNADKVCAAVLQQVASASPSQIELFEALRAAGVATQISYY
EECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEC
PGATAASDETHVFYLTTNRLRAMRENIAWFDYWLLDKRDADAPFPDHVVKWDRLKKNLPD
CCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
RCAAAP
HHCCCC
>Mature Secondary Structure
MKIALRSGLPAVALLAAAALSPAAQAGESKGRPWTLEDILTVPEVNEIALSDNGRLAIYA
CEEEECCCCHHHHHHHHHHCCHHHHCCCCCCCCEEHHHHCCCCCCCEEEECCCCEEEEEE
AEIADLDAGKPRSHIRIVDVETGRTKELLTVDTIKSLRSVPGTQDWSALVDLGEGQQLYR
EEECCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCHHHHCCCCCCEEEE
IDTEGKLLPLIVNPNPVPVGKADMSFPLGGGIRPSHIGILDYDWSPDGKWLWYSQLRAKS
ECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHCCC
DGPRVRFDEEVTALLGRRRSTIDVEVDFFLRNPEGDTTRIMARPSTDRVATRGGGRVLWR
CCCCEEECHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCEECCCCEEEEE
GNEVQFRIETSDGTLGGAFEFVAWNRVNRTVRTLAKQRDLLSMSILVGPRGGQLSTSGLG
CCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEECCCCC
SDRELIETSAEGRPHSYGRVAFDIGDSRSAGWKRSRDGKRVVIGTRGLGDARYGLALIDK
CCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECC
TGVRELRADASLTRCGFDGMLRSAICVEEGMSRPPRLVRVDLGTDKITDLGPISPRHEEI
CCHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHH
EPLQTIARTFVSRDGYWSSGYVLLPRGHRAADRHPAVVVTHGTDADDRFAEPANQWNYPV
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHCCCHHCCCCCH
QLLAERGYVVLLLNDPSPGQSKDLMDAMHAWLRGKGPPDPETVQQKLWLTGVHSFEDAVT
HEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
ELAAEGLIDPARVGIAGYSRGSQMVNVTVTNSKMFRAASSGDGGFLEPAGYATGRSSYDA
HHHHHCCCCHHHCCEEECCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCE
VYGGAPLSDNIERWRRFAPSLNADKVCAAVLQQVASASPSQIELFEALRAAGVATQISYY
EECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEC
PGATAASDETHVFYLTTNRLRAMRENIAWFDYWLLDKRDADAPFPDHVVKWDRLKKNLPD
CCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
RCAAAP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA