| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487883
Identifier: 103487883
GI number: 103487883
Start: 2538365
End: 2538694
Strand: Direct
Name: 103487883
Synonym: Sala_2403
Alternate gene names: NA
Gene position: 2538365-2538694 (Clockwise)
Preceding gene: 103487881
Following gene: 103487884
Centisome position: 75.88
GC content: 63.64
Gene sequence:
>330_bases ATGCAAACCGATTCCGCCTTGTCCATTCTCGCCGCGCTGGGACACCCGACACGCCTCGATGCCTTTCGCCTGCTCGTCAA ACATGAGCCCGACGGCCTGTCGACGGGTCAACTTGTCGAAGCGTCGGGACTCACCCAGAGTACCTTCTCCACCCATCTCG CGGTGCTCGCCAAAGCCGGCCTCGTGATATCCGAGAAGCGCGGGCGTCAAATTATCCAGCGCGCGGATATCGACGCGCTT CGCGGCCTGATGCTCTTCCTGGCGAAGGACTGCTGCCAAGGCCGGGCGGAGCTGTGCGAGCCGCTGCTCGCAGAACTCGC CTGCTGCTGA
Upstream 100 bases:
>100_bases ACCCATGACGAGGCTATAGCCCGATCGCGCAAGCGGACCAACTAATCGGATATTCCCGATTGGAATTGACGGATGCGATT CCATCGGATAATTCCGATGC
Downstream 100 bases:
>100_bases AGGAACGCGCGCTATGACCGACATCGTCATCTACCATAACCCCGCCTGCGGGACCTCCCGCAACACCCTCGCGATGATTC GCAATGCCGGGATCGAACCG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; ArsR Family Regulatory Protein; Transcriptional Regulator/Arsenate Reductase; Regulatory Protein Arsr; ArsR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Protein Tyrosine Phosphatase; Arsenate Reductase; Arsenical Resistance Transcriptional Regulator; ArsR Family Regulatory; Transcriptional Regulator Containing HTH Domain ArsR; ArsR Operon Regulator ArsI; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulator ArsR Domain; Transcription Regulator ArsR; Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein ArsR Family; Transcriptional Regulator ArsR; Xin-Antitoxin System Antitoxin Component ArsR Family; Arsenic Operon Regulator; Arsenic Operon Regulator-Like Protein; Arsenical Resistance Transcriptional Regulator Arsr
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQTDSALSILAALGHPTRLDAFRLLVKHEPDGLSTGQLVEASGLTQSTFSTHLAVLAKAGLVISEKRGRQIIQRADIDAL RGLMLFLAKDCCQGRAELCEPLLAELACC
Sequences:
>Translated_109_residues MQTDSALSILAALGHPTRLDAFRLLVKHEPDGLSTGQLVEASGLTQSTFSTHLAVLAKAGLVISEKRGRQIIQRADIDAL RGLMLFLAKDCCQGRAELCEPLLAELACC >Mature_109_residues MQTDSALSILAALGHPTRLDAFRLLVKHEPDGLSTGQLVEASGLTQSTFSTHLAVLAKAGLVISEKRGRQIIQRADIDAL RGLMLFLAKDCCQGRAELCEPLLAELACC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11674; Mature: 11674
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDSALSILAALGHPTRLDAFRLLVKHEPDGLSTGQLVEASGLTQSTFSTHLAVLAKAG CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHC LVISEKRGRQIIQRADIDALRGLMLFLAKDCCQGRAELCEPLLAELACC CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MQTDSALSILAALGHPTRLDAFRLLVKHEPDGLSTGQLVEASGLTQSTFSTHLAVLAKAG CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHC LVISEKRGRQIIQRADIDALRGLMLFLAKDCCQGRAELCEPLLAELACC CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA