| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487829
Identifier: 103487829
GI number: 103487829
Start: 2473246
End: 2473656
Strand: Reverse
Name: 103487829
Synonym: Sala_2348
Alternate gene names: NA
Gene position: 2473656-2473246 (Counterclockwise)
Preceding gene: 103487830
Following gene: 103487828
Centisome position: 73.95
GC content: 68.13
Gene sequence:
>411_bases ATGACCATAGCCATGACCCGCGGCGCGCACCATGTCGGGCTCGCCGTCCGCGACGTCGCCGAGGCGCGCGACTTTTTTGT CGAGACGCTGGGTTTCACTGTCGCGGCGGAGCGCCCGGACTATCCGGCGATCTTCGTGTCCGACGGCACGACGCTGCTCA CCTTGTGGCAGGTCGCCGATCCGGCGCGCGCGACGCGCTTCGATCGCCGCGCCAACATCGGCCTGCACCATCTGGCGCTC GCAGTCGCCGATCTCGACGCGCTGCGCGCCGTTTTTGCACGGGTGCAGGCGCATCCCGGCGTGACGATCGAGTTCGACCC CGAACCGATCCGCGAGGGCGCGACGACGCACCATTTCATCTGCGCGATGCCCGGCGGCATCCGCATCGAATTTGCCACCC CTTTCGCCTGA
Upstream 100 bases:
>100_bases CCGAAGCCACGGCCTGAAGCCCCGCGCGCAACCTCCTTACCCCTCGCAAGCGCGCGACACCTGCGTCGGGGGGCGATATT TTGAACAGGAAAGGAAATCC
Downstream 100 bases:
>100_bases AGACGCGCGTCATGTCCCGGCCCCCGCTTCCACCTTTCGACGCCGTCAGCGCGGCGCGCAAGGTCCGTCTGGCCGAAGAC GGCTGGAACAGTCGCGATCC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTIAMTRGAHHVGLAVRDVAEARDFFVETLGFTVAAERPDYPAIFVSDGTTLLTLWQVADPARATRFDRRANIGLHHLAL AVADLDALRAVFARVQAHPGVTIEFDPEPIREGATTHHFICAMPGGIRIEFATPFA
Sequences:
>Translated_136_residues MTIAMTRGAHHVGLAVRDVAEARDFFVETLGFTVAAERPDYPAIFVSDGTTLLTLWQVADPARATRFDRRANIGLHHLAL AVADLDALRAVFARVQAHPGVTIEFDPEPIREGATTHHFICAMPGGIRIEFATPFA >Mature_135_residues TIAMTRGAHHVGLAVRDVAEARDFFVETLGFTVAAERPDYPAIFVSDGTTLLTLWQVADPARATRFDRRANIGLHHLALA VADLDALRAVFARVQAHPGVTIEFDPEPIREGATTHHFICAMPGGIRIEFATPFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14833; Mature: 14702
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAMTRGAHHVGLAVRDVAEARDFFVETLGFTVAAERPDYPAIFVSDGTTLLTLWQVAD CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCEEEEEEECCC PARATRFDRRANIGLHHLALAVADLDALRAVFARVQAHPGVTIEFDPEPIREGATTHHFI CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCEEEE CAMPGGIRIEFATPFA EECCCCEEEEEECCCC >Mature Secondary Structure TIAMTRGAHHVGLAVRDVAEARDFFVETLGFTVAAERPDYPAIFVSDGTTLLTLWQVAD EEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEECCCEEEEEEECCC PARATRFDRRANIGLHHLALAVADLDALRAVFARVQAHPGVTIEFDPEPIREGATTHHFI CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCEEEE CAMPGGIRIEFATPFA EECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA