| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is aat [H]
Identifier: 103487773
GI number: 103487773
Start: 2417468
End: 2418181
Strand: Direct
Name: aat [H]
Synonym: Sala_2292
Alternate gene names: 103487773
Gene position: 2417468-2418181 (Clockwise)
Preceding gene: 103487772
Following gene: 103487776
Centisome position: 72.27
GC content: 70.87
Gene sequence:
>714_bases ATGGCCGACGGGGCGGACGACCCGTCGGTCCATTGGGTCGAGCCGCGGCTGCGCGCGATCCTGCCGCTCGACGGTTTTCA CCTCTCGCGCAGCCTGCGGAAAGCGATTCTCGCCGAGCGGTTCCGCGTCACCACCGACACCGCCTTTGCCGATATGGTCG CGCTCTGCGCCGAGTCCGCCGACGACCGGCCGACGACGTGGATCAACCCCGTCATCAAGGCAAGCTACGACCGGCTCTTC CGCCTTGGTCACGCGCACAGCGTCGAATGCTGGCAGGGCGGCGAACTGGTCGGCGGGCTTTACGGGGTGACGCTCGGCCG CGCCTTTTTCGGCGAATCGATGGTCAGCCGCGCGCGCGATGCGTCGAAGGTCGCGCTCGCCCACCTCGTCGCGCGGCTGA TCGCCGGCGGCTGGAAACTGCTCGACTGCCAGTTCCTCACCCCGCACCTCGCCAGCCTCGGCGCGATCGAGATCCGCCAG GCCGATTATCTGGCCCGGCTTTACTCGGTATTGGCCGGGGGCGACGGCGCCGGGGTGGCCGCCGGTTCCGGCGCCGGTGC CGGTGCGGCAGGGCTTTCGCCCCCCTCGCCGCCGTTCGTCGCGGGCGACTGGGGCGCGCTCGATGCCCTGGGCGCCGCAG CCGCGGCCGACGGGCGCGCGACCGGCTCGCCGCCGGGATATGTCATTGTGCAGCTTTTGACGAACACGTCATAG
Upstream 100 bases:
>100_bases ACCGCATGACGCTGAAGTTCGTGAAGCCCGCACGCTGAAGCCGATCGCCTCCATCGATCCGGCGCTGCTGCTCAGCGCCT ATGCGCAGGGGATTTTCCCG
Downstream 100 bases:
>100_bases ATCGGATGCTCGATCACATTGCGGTCGGGCCGCTCGCGGAAAAGCCAGCCCGAAAAGACGCGGCGCCATTTGTCGTCGCG CTGATCCTGCACCGAAAGCT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESADDRPTTWINPVIKASYDRLF RLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARDASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQ ADYLARLYSVLAGGDGAGVAAGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS
Sequences:
>Translated_237_residues MADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESADDRPTTWINPVIKASYDRLF RLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARDASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQ ADYLARLYSVLAGGDGAGVAAGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS >Mature_236_residues ADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESADDRPTTWINPVIKASYDRLFR LGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARDASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQA DYLARLYSVLAGGDGAGVAAGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=167, Percent_Identity=44.9101796407186, Blast_Score=134, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 24636; Mature: 24505
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESA CCCCCCCCCEEEECCHHHEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC DDRPTTWINPVIKASYDRLFRLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARD CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQADYLARLYSVLAGGDGAGVA HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC AGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure ADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESA CCCCCCCCEEEECCHHHEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC DDRPTTWINPVIKASYDRLFRLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARD CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQADYLARLYSVLAGGDGAGVA HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC AGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA