Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is aat [H]

Identifier: 103487773

GI number: 103487773

Start: 2417468

End: 2418181

Strand: Direct

Name: aat [H]

Synonym: Sala_2292

Alternate gene names: 103487773

Gene position: 2417468-2418181 (Clockwise)

Preceding gene: 103487772

Following gene: 103487776

Centisome position: 72.27

GC content: 70.87

Gene sequence:

>714_bases
ATGGCCGACGGGGCGGACGACCCGTCGGTCCATTGGGTCGAGCCGCGGCTGCGCGCGATCCTGCCGCTCGACGGTTTTCA
CCTCTCGCGCAGCCTGCGGAAAGCGATTCTCGCCGAGCGGTTCCGCGTCACCACCGACACCGCCTTTGCCGATATGGTCG
CGCTCTGCGCCGAGTCCGCCGACGACCGGCCGACGACGTGGATCAACCCCGTCATCAAGGCAAGCTACGACCGGCTCTTC
CGCCTTGGTCACGCGCACAGCGTCGAATGCTGGCAGGGCGGCGAACTGGTCGGCGGGCTTTACGGGGTGACGCTCGGCCG
CGCCTTTTTCGGCGAATCGATGGTCAGCCGCGCGCGCGATGCGTCGAAGGTCGCGCTCGCCCACCTCGTCGCGCGGCTGA
TCGCCGGCGGCTGGAAACTGCTCGACTGCCAGTTCCTCACCCCGCACCTCGCCAGCCTCGGCGCGATCGAGATCCGCCAG
GCCGATTATCTGGCCCGGCTTTACTCGGTATTGGCCGGGGGCGACGGCGCCGGGGTGGCCGCCGGTTCCGGCGCCGGTGC
CGGTGCGGCAGGGCTTTCGCCCCCCTCGCCGCCGTTCGTCGCGGGCGACTGGGGCGCGCTCGATGCCCTGGGCGCCGCAG
CCGCGGCCGACGGGCGCGCGACCGGCTCGCCGCCGGGATATGTCATTGTGCAGCTTTTGACGAACACGTCATAG

Upstream 100 bases:

>100_bases
ACCGCATGACGCTGAAGTTCGTGAAGCCCGCACGCTGAAGCCGATCGCCTCCATCGATCCGGCGCTGCTGCTCAGCGCCT
ATGCGCAGGGGATTTTCCCG

Downstream 100 bases:

>100_bases
ATCGGATGCTCGATCACATTGCGGTCGGGCCGCTCGCGGAAAAGCCAGCCCGAAAAGACGCGGCGCCATTTGTCGTCGCG
CTGATCCTGCACCGAAAGCT

Product: leucyl/phenylalanyl-tRNA--protein transferase

Products: NA

Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESADDRPTTWINPVIKASYDRLF
RLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARDASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQ
ADYLARLYSVLAGGDGAGVAAGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS

Sequences:

>Translated_237_residues
MADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESADDRPTTWINPVIKASYDRLF
RLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARDASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQ
ADYLARLYSVLAGGDGAGVAAGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS
>Mature_236_residues
ADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESADDRPTTWINPVIKASYDRLFR
LGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARDASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQA
DYLARLYSVLAGGDGAGVAAGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS

Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]

COG id: COG2360

COG function: function code O; Leu/Phe-tRNA-protein transferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L/F-transferase family [H]

Homologues:

Organism=Escherichia coli, GI1787111, Length=167, Percent_Identity=44.9101796407186, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR004616 [H]

Pfam domain/function: PF03588 Leu_Phe_trans [H]

EC number: =2.3.2.6 [H]

Molecular weight: Translated: 24636; Mature: 24505

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESA
CCCCCCCCCEEEECCHHHEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
DDRPTTWINPVIKASYDRLFRLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQADYLARLYSVLAGGDGAGVA
HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
AGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS
CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
ADGADDPSVHWVEPRLRAILPLDGFHLSRSLRKAILAERFRVTTDTAFADMVALCAESA
CCCCCCCCEEEECCHHHEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
DDRPTTWINPVIKASYDRLFRLGHAHSVECWQGGELVGGLYGVTLGRAFFGESMVSRARD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASKVALAHLVARLIAGGWKLLDCQFLTPHLASLGAIEIRQADYLARLYSVLAGGDGAGVA
HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
AGSGAGAGAAGLSPPSPPFVAGDWGALDALGAAAAADGRATGSPPGYVIVQLLTNTS
CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA