| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487772
Identifier: 103487772
GI number: 103487772
Start: 2416407
End: 2417405
Strand: Direct
Name: 103487772
Synonym: Sala_2291
Alternate gene names: NA
Gene position: 2416407-2417405 (Clockwise)
Preceding gene: 103487771
Following gene: 103487773
Centisome position: 72.24
GC content: 65.17
Gene sequence:
>999_bases ATGAAACCCACCTTGTCGACATCGCGCCGGTTGTTGCGGCGCCAGTTCGCGACCTCGGCGACGCCGAACAGCGCCGCTGC GCCAATCGCCACCGACAGCATCGACACTTGCATTGCCGCGCGCACCTTCGCAAACAGGGAGAAGTCCCCCAAAAGAGAGG TTGCCCATATGCGTTCGCTGATCCTCGTTGCAAGTAATGCTATCGCCCTCGCCGTCGCCGCGCCCGTCCTCGCCGACCAT CATGGCGGCGGCCACGCCGCGCACCACGGCCATGACGCCATCGCCGCCGCGGTCGCCGCACCGACGCGCACCCCCGCGAA TATCGAGCGCGACAAATATCGCAACCCAGCAGAAACGCTCGCCTTTTTCGGCGTGAAGCCCGGCGACACCGTGGTCGAGC TGTGGCCGGGCGGCGGCTGGTACACCGAAATCCTCGCGCCGCTGACGAAAGCGGGCGGCGGCACGCTCTATGTCGCGGCG CCGTGGGAACGCGGGCTTGCTCGCATCAGGGAAAAGCAGGCGGCCGACACGGCGACCTATGGCGCGCTCAGGCTTGCGGA GTTTCCGGCGACCGGCGCGGGACCGAAAGTGCCTGACGGCAGCGCCGATGTCGTGCTCACCTTCCGCAACGTTCACAACT GGCGCTTCGGCGGCGCCGACAATACCGCCAACGCCTTCAAACAGATTTTCGCGATGCTGAAGCCCGGCGGCACGCTCGGT GTCGTCGAACACCGGCTGAACGAGGACGACGACGCCGCGAAGGAGGAAAAATCGGGCTATATGAAGGAAAGCTCGATCAT CGCCTTTGCCGAGGCCGCGGGCTTCGAGCTGGCGGGCAAGAGCGAGATCAACGCCAATCCCAAAGACACCAAGGATTATG AAAAGGGCGTCTGGACGCTCCCGCCGGTGTTGCGCGAGGGGGAGACCGACCGCGCGAAATATGTCGCGATCGGCGAATCG GACCGCATGACGCTGAAGTTCGTGAAGCCCGCACGCTGA
Upstream 100 bases:
>100_bases GAGTGAACGGCGCTTAGGGTCCTGACCCTACGGCTTCAACGCCAGCGCCGCCGCGAACAGGGCAACCCCCGCCGACGCCA GCGCAATCCCGCGCCACGGC
Downstream 100 bases:
>100_bases AGCCGATCGCCTCCATCGATCCGGCGCTGCTGCTCAGCGCCTATGCGCAGGGGATTTTCCCGATGGCCGACGGGGCGGAC GACCCGTCGGTCCATTGGGT
Product: methyltransferase type 11
Products: NA
Alternate protein names: O-Methyltransferase; Methyltransferase Type; Methyltransferase-Like Protein; Exported Methyltransferase; Tat Pathway Signal Sequence Domain Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKPTLSTSRRLLRRQFATSATPNSAAAPIATDSIDTCIAARTFANREKSPKREVAHMRSLILVASNAIALAVAAPVLADH HGGGHAAHHGHDAIAAAVAAPTRTPANIERDKYRNPAETLAFFGVKPGDTVVELWPGGGWYTEILAPLTKAGGGTLYVAA PWERGLARIREKQAADTATYGALRLAEFPATGAGPKVPDGSADVVLTFRNVHNWRFGGADNTANAFKQIFAMLKPGGTLG VVEHRLNEDDDAAKEEKSGYMKESSIIAFAEAAGFELAGKSEINANPKDTKDYEKGVWTLPPVLREGETDRAKYVAIGES DRMTLKFVKPAR
Sequences:
>Translated_332_residues MKPTLSTSRRLLRRQFATSATPNSAAAPIATDSIDTCIAARTFANREKSPKREVAHMRSLILVASNAIALAVAAPVLADH HGGGHAAHHGHDAIAAAVAAPTRTPANIERDKYRNPAETLAFFGVKPGDTVVELWPGGGWYTEILAPLTKAGGGTLYVAA PWERGLARIREKQAADTATYGALRLAEFPATGAGPKVPDGSADVVLTFRNVHNWRFGGADNTANAFKQIFAMLKPGGTLG VVEHRLNEDDDAAKEEKSGYMKESSIIAFAEAAGFELAGKSEINANPKDTKDYEKGVWTLPPVLREGETDRAKYVAIGES DRMTLKFVKPAR >Mature_332_residues MKPTLSTSRRLLRRQFATSATPNSAAAPIATDSIDTCIAARTFANREKSPKREVAHMRSLILVASNAIALAVAAPVLADH HGGGHAAHHGHDAIAAAVAAPTRTPANIERDKYRNPAETLAFFGVKPGDTVVELWPGGGWYTEILAPLTKAGGGTLYVAA PWERGLARIREKQAADTATYGALRLAEFPATGAGPKVPDGSADVVLTFRNVHNWRFGGADNTANAFKQIFAMLKPGGTLG VVEHRLNEDDDAAKEEKSGYMKESSIIAFAEAAGFELAGKSEINANPKDTKDYEKGVWTLPPVLREGETDRAKYVAIGES DRMTLKFVKPAR
Specific function: Unknown
COG id: COG4798
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35508; Mature: 35508
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTLSTSRRLLRRQFATSATPNSAAAPIATDSIDTCIAARTFANREKSPKREVAHMRSL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH ILVASNAIALAVAAPVLADHHGGGHAAHHGHDAIAAAVAAPTRTPANIERDKYRNPAETL HHHHCCHHEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH AFFGVKPGDTVVELWPGGGWYTEILAPLTKAGGGTLYVAAPWERGLARIREKQAADTATY EEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHH GALRLAEFPATGAGPKVPDGSADVVLTFRNVHNWRFGGADNTANAFKQIFAMLKPGGTLG HHEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCCEE VVEHRLNEDDDAAKEEKSGYMKESSIIAFAEAAGFELAGKSEINANPKDTKDYEKGVWTL HHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCHHHCCCCCC PPVLREGETDRAKYVAIGESDRMTLKFVKPAR CHHHHCCCCCCEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure MKPTLSTSRRLLRRQFATSATPNSAAAPIATDSIDTCIAARTFANREKSPKREVAHMRSL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH ILVASNAIALAVAAPVLADHHGGGHAAHHGHDAIAAAVAAPTRTPANIERDKYRNPAETL HHHHCCHHEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH AFFGVKPGDTVVELWPGGGWYTEILAPLTKAGGGTLYVAAPWERGLARIREKQAADTATY EEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHH GALRLAEFPATGAGPKVPDGSADVVLTFRNVHNWRFGGADNTANAFKQIFAMLKPGGTLG HHEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCCEE VVEHRLNEDDDAAKEEKSGYMKESSIIAFAEAAGFELAGKSEINANPKDTKDYEKGVWTL HHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCHHHCCCCCC PPVLREGETDRAKYVAIGESDRMTLKFVKPAR CHHHHCCCCCCEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA