| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487692
Identifier: 103487692
GI number: 103487692
Start: 2321779
End: 2322477
Strand: Reverse
Name: 103487692
Synonym: Sala_2211
Alternate gene names: NA
Gene position: 2322477-2321779 (Counterclockwise)
Preceding gene: 103487694
Following gene: 103487691
Centisome position: 69.43
GC content: 69.24
Gene sequence:
>699_bases TTGGCTATGGCGAGTTTCGACTCCGCGTGGTTCCTCTACGGGGCATTGCTGCTCCTTCTCGCGACAAGCTTCGTCGTGCG CATCGACTATGCGCGCATCGGCCTTGCCGCGGCGGCGTTCGTCGCGCTGCCGCTCACCCTCTTTCGCGCCTCCGACCCCG GTTACAGCCTGCTCGTGCTCGCGATCCTCGCGGTCAATATCGGCATCCTGGCGCGGCTATGGCTGCGCGGGGCGAAAGTG CGATTCTCGGTCGAGGATGAGGAGCTGCGACGGCGGCATTTTCCGGGGCTGGGCGCGCACGCCGCGCGCGGCCTGATCGA CCAGGGACACTGGATTTCGGCGCAGCGCGGCGAAGTGCTGATCCGCGAAAATCAGGCGGCGCCCAGCCTTTTCTATCTCG CCGACGGTCGCGCGACCATCATGCGCGACGGCGCCGAGGTCGGGCAACTGGGCGATGGCGAGCTGATCGGCGAGGCGACG GTGCTGGACGGCTCGCACGCAACGGGAACCGTCGTGCTCGCCAGCAATGCGCGGCTGTGGTTTGTCCCGGCGGCGGCGCT GCGCGCCTATCTCGCGGCGAACCCCGGCATCGCGGCCGAACTGCACGAAGGCTTCGCGCGCGCGCTGCGCGGCAAGCTGG CGAGCGCCAACACACGCATCGCCGACCGTACGCCCGCATCGTCGGCCGCGGGCGCTTGA
Upstream 100 bases:
>100_bases GTTTATTGCGACTTTGGCGCCTGTTGGGTGCGTTCAAGGTTCAGGGCTATCGACAACGTCATACACCCAGTGGCCCGTCC GCGGGCCGGGATGCGAGCGA
Downstream 100 bases:
>100_bases GCCTCGAATCTGCGATGCGCTGCTGCTAATCTTTGCCCCATGACGATGATTCTTTACGGCATTCCGAATTGCGACACGGT GAAAAAGGCGCGTCGCTGGC
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MAMASFDSAWFLYGALLLLLATSFVVRIDYARIGLAAAAFVALPLTLFRASDPGYSLLVLAILAVNIGILARLWLRGAKV RFSVEDEELRRRHFPGLGAHAARGLIDQGHWISAQRGEVLIRENQAAPSLFYLADGRATIMRDGAEVGQLGDGELIGEAT VLDGSHATGTVVLASNARLWFVPAAALRAYLAANPGIAAELHEGFARALRGKLASANTRIADRTPASSAAGA
Sequences:
>Translated_232_residues MAMASFDSAWFLYGALLLLLATSFVVRIDYARIGLAAAAFVALPLTLFRASDPGYSLLVLAILAVNIGILARLWLRGAKV RFSVEDEELRRRHFPGLGAHAARGLIDQGHWISAQRGEVLIRENQAAPSLFYLADGRATIMRDGAEVGQLGDGELIGEAT VLDGSHATGTVVLASNARLWFVPAAALRAYLAANPGIAAELHEGFARALRGKLASANTRIADRTPASSAAGA >Mature_231_residues AMASFDSAWFLYGALLLLLATSFVVRIDYARIGLAAAAFVALPLTLFRASDPGYSLLVLAILAVNIGILARLWLRGAKVR FSVEDEELRRRHFPGLGAHAARGLIDQGHWISAQRGEVLIRENQAAPSLFYLADGRATIMRDGAEVGQLGDGELIGEATV LDGSHATGTVVLASNARLWFVPAAALRAYLAANPGIAAELHEGFARALRGKLASANTRIADRTPASSAAGA
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24562; Mature: 24430
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMASFDSAWFLYGALLLLLATSFVVRIDYARIGLAAAAFVALPLTLFRASDPGYSLLVL CCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH AILAVNIGILARLWLRGAKVRFSVEDEELRRRHFPGLGAHAARGLIDQGHWISAQRGEVL HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCHHHHHCCCCCCCEEECCCCCEE IRENQAAPSLFYLADGRATIMRDGAEVGQLGDGELIGEATVLDGSHATGTVVLASNARLW EECCCCCCEEEEEECCCEEEEECCHHHCCCCCCCEECCEEEECCCCCCEEEEEECCCEEE FVPAAALRAYLAANPGIAAELHEGFARALRGKLASANTRIADRTPASSAAGA EEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AMASFDSAWFLYGALLLLLATSFVVRIDYARIGLAAAAFVALPLTLFRASDPGYSLLVL CCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH AILAVNIGILARLWLRGAKVRFSVEDEELRRRHFPGLGAHAARGLIDQGHWISAQRGEVL HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCHHHHHCCCCCCCEEECCCCCEE IRENQAAPSLFYLADGRATIMRDGAEVGQLGDGELIGEATVLDGSHATGTVVLASNARLW EECCCCCCEEEEEECCCEEEEECCHHHCCCCCCCEECCEEEECCCCCCEEEEEECCCEEE FVPAAALRAYLAANPGIAAELHEGFARALRGKLASANTRIADRTPASSAAGA EEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA