The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103487565

Identifier: 103487565

GI number: 103487565

Start: 2190457

End: 2191347

Strand: Reverse

Name: 103487565

Synonym: Sala_2084

Alternate gene names: NA

Gene position: 2191347-2190457 (Counterclockwise)

Preceding gene: 103487569

Following gene: 103487562

Centisome position: 65.51

GC content: 64.87

Gene sequence:

>891_bases
ATGTCCAGCCTTTCCCGGTCTCCCACCCCCGCCGATCTGTCGATCACCCCGCGCGACATGCGCTTTGGCCGCGACGACAA
ACAGGGCCGCTGGTGGCTGAACGGCGATCCGATCGCCTCGGCCTTTCACACCGCGCTGTCGGTCACCTTTCCCAAGGGCG
AGGCGATGTTCATCGAGGCGGTGAAGGCGCACCGGGGCGGCGTTCCCGAAAAGCTGGCGCGCGAAATCCGCGCCTTTACC
CAGCAGGAAGTGATCCACAGCCGCGAGCATGTGGTGTTCAACAGGAAGGCGGCCGAGGCGGGGTATGACCTCAGCGAACT
CGAAGCCGACGTCGACGAGGTGATGGACATCATCAAGGCGCGGCCGCCGATCGTCAACCTGATGGCGACGATCGCGCTCG
AACATTATACCGCGATGATGGCGGCGGTGATGCTGCGCGACGAGAAAATGTATGCGGGCGCCGAACCCGAATGGGCAATG
CTGTGGAAATGGCACGCAATCGAGGAAATCGAGCATAAGGGCGTCGCCTATGACACCTGGCTGCACGCGACGAGGGACTG
GAGCCGGCTTAGGCGCTGGCGCGCCAGGTCGCTGATGATGCTGCTCGTCACCGCGCGCTTCTGGCCCAAGCGGGTGAAGG
GGATGAAGGCGCTGCTGCGGCAGGACGGGCTGACCGGCTGGCGCGTCACCGCGCGTATCTGGTGGTATCTGCTCGGTTCG
CCGGGCGTGCTGCGCAAAAGCTTTCTGCCCTGGCTGTCCTATTTCATGCCGGGTTTCCACCCGTGGAACCACGACGACCG
CGCGCTGATCGGCAAATATGAAAGCGACTATGCCGACGCGGTGATGCCGGCGCATTCGTCGCGCCCCGACCGGGCCGCGG
CTGCGGCCTGA

Upstream 100 bases:

>100_bases
ACGGCTTTCTTCGGGACTGAGACGCTTTTTGACTATTGACATTTATGTAAGTTAAACCCTATTGCTGACCCCGACACCCC
TTTTCGACGGTAAACGCCAT

Downstream 100 bases:

>100_bases
GCATCCTTTCCTGCGAAGGCGGGCCGTCCGGAGCGGTCCTCTCTCTCCCCGTCTCCGGGGCCTGCCTTTGCGGGAGTCGC
GGCGTCTCAATGCCCCATGT

Product: FF domain-containing protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; FF Domain Protein; Conserved Protein UCP; Metal-Dependent Hydrolase-Like; Metal Hydrolase

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSSLSRSPTPADLSITPRDMRFGRDDKQGRWWLNGDPIASAFHTALSVTFPKGEAMFIEAVKAHRGGVPEKLAREIRAFT
QQEVIHSREHVVFNRKAAEAGYDLSELEADVDEVMDIIKARPPIVNLMATIALEHYTAMMAAVMLRDEKMYAGAEPEWAM
LWKWHAIEEIEHKGVAYDTWLHATRDWSRLRRWRARSLMMLLVTARFWPKRVKGMKALLRQDGLTGWRVTARIWWYLLGS
PGVLRKSFLPWLSYFMPGFHPWNHDDRALIGKYESDYADAVMPAHSSRPDRAAAAA

Sequences:

>Translated_296_residues
MSSLSRSPTPADLSITPRDMRFGRDDKQGRWWLNGDPIASAFHTALSVTFPKGEAMFIEAVKAHRGGVPEKLAREIRAFT
QQEVIHSREHVVFNRKAAEAGYDLSELEADVDEVMDIIKARPPIVNLMATIALEHYTAMMAAVMLRDEKMYAGAEPEWAM
LWKWHAIEEIEHKGVAYDTWLHATRDWSRLRRWRARSLMMLLVTARFWPKRVKGMKALLRQDGLTGWRVTARIWWYLLGS
PGVLRKSFLPWLSYFMPGFHPWNHDDRALIGKYESDYADAVMPAHSSRPDRAAAAA
>Mature_295_residues
SSLSRSPTPADLSITPRDMRFGRDDKQGRWWLNGDPIASAFHTALSVTFPKGEAMFIEAVKAHRGGVPEKLAREIRAFTQ
QEVIHSREHVVFNRKAAEAGYDLSELEADVDEVMDIIKARPPIVNLMATIALEHYTAMMAAVMLRDEKMYAGAEPEWAML
WKWHAIEEIEHKGVAYDTWLHATRDWSRLRRWRARSLMMLLVTARFWPKRVKGMKALLRQDGLTGWRVTARIWWYLLGSP
GVLRKSFLPWLSYFMPGFHPWNHDDRALIGKYESDYADAVMPAHSSRPDRAAAAA

Specific function: Unknown

COG id: COG3687

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34003; Mature: 33871

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLSRSPTPADLSITPRDMRFGRDDKQGRWWLNGDPIASAFHTALSVTFPKGEAMFIEA
CCCCCCCCCCCCCEECHHHHHCCCCCCCCEEEECCCHHHHHHHHHHEEECCCCCHHHHHH
VKAHRGGVPEKLAREIRAFTQQEVIHSREHVVFNRKAAEAGYDLSELEADVDEVMDIIKA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCHHHHHHHHHHHHHHHHC
RPPIVNLMATIALEHYTAMMAAVMLRDEKMYAGAEPEWAMLWKWHAIEEIEHKGVAYDTW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCHHHH
LHATRDWSRLRRWRARSLMMLLVTARFWPKRVKGMKALLRQDGLTGWRVTARIWWYLLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PGVLRKSFLPWLSYFMPGFHPWNHDDRALIGKYESDYADAVMPAHSSRPDRAAAAA
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure 
SSLSRSPTPADLSITPRDMRFGRDDKQGRWWLNGDPIASAFHTALSVTFPKGEAMFIEA
CCCCCCCCCCCCEECHHHHHCCCCCCCCEEEECCCHHHHHHHHHHEEECCCCCHHHHHH
VKAHRGGVPEKLAREIRAFTQQEVIHSREHVVFNRKAAEAGYDLSELEADVDEVMDIIKA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCHHHHHHHHHHHHHHHHC
RPPIVNLMATIALEHYTAMMAAVMLRDEKMYAGAEPEWAMLWKWHAIEEIEHKGVAYDTW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCHHHH
LHATRDWSRLRRWRARSLMMLLVTARFWPKRVKGMKALLRQDGLTGWRVTARIWWYLLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PGVLRKSFLPWLSYFMPGFHPWNHDDRALIGKYESDYADAVMPAHSSRPDRAAAAA
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA