| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is folE [H]
Identifier: 103487395
GI number: 103487395
Start: 2009778
End: 2010380
Strand: Reverse
Name: folE [H]
Synonym: Sala_1911
Alternate gene names: 103487395
Gene position: 2010380-2009778 (Counterclockwise)
Preceding gene: 103487397
Following gene: 103487389
Centisome position: 60.1
GC content: 64.18
Gene sequence:
>603_bases ATGAGCGAATTGGGACAGGATTTGGGACCGGACGGCAAGCTGATCGTTCCGGATCATGTCGCGGACGCCGTGCGCACGCT GATCGAATGGGCCGGCGACGATCCTGCGCGCGAAGGCCTGCTCGACACGCCACGCCGCGTCGCGCGCGCGTGGAAGGAAT ATTGTTCGGGCTATGGCGAAGATCCTTCGATCCACCTCTCGCGCACCTTTGAGGAGGTTGGCGGCTATGACGAGGTCGTG CTGCTGCGCGACATTCCCTTCCAGTCGCATTGCGAACATCATATGGCGCCGATCACGGGCAAGGCGTCGATCGCCTATCT GCCCAGGGACCGCGTCGTCGGCATTTCCAAGCTCGCGCGCGTTCTCAATGGCTATGCGCGGCGGCTTCAGGTGCAGGAGC GGCTGACCGCCGAAGTCGCGCAGTGCATCTGGGACAATCTCCAGCCGCACGGGGTCGCGGTGGTAATCGACGCGCAGCAT GGCTGCATGACCGGACGCGGCGTCCGCACGCCCGGCGTCGGCATGGTAACGAGCCGCCTGCTCGGCTGTTTCCTCGAAGA CCAGCGCAGCCGGAAGGAAGTGCTGGGTTTGATGGGCTATTGA
Upstream 100 bases:
>100_bases CAACTTGATCGTCGACGACAAATTCTTCGTGTACGGGCCTTGCGTATCGACCGCCGCGCGCCGAAATGTGCGACATGATA GCAACAGTGAAAGTGGGGCG
Downstream 100 bases:
>100_bases TCCTCAGCGCCGCCACATTCTGAGCAACTGATACTGGACGGCTTGGAGTCGCGTGTAGTTTGCGGGCTCCATCTTGCCGC CCTCCAGCGCCGCGATCTCG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSELGQDLGPDGKLIVPDHVADAVRTLIEWAGDDPAREGLLDTPRRVARAWKEYCSGYGEDPSIHLSRTFEEVGGYDEVV LLRDIPFQSHCEHHMAPITGKASIAYLPRDRVVGISKLARVLNGYARRLQVQERLTAEVAQCIWDNLQPHGVAVVIDAQH GCMTGRGVRTPGVGMVTSRLLGCFLEDQRSRKEVLGLMGY
Sequences:
>Translated_200_residues MSELGQDLGPDGKLIVPDHVADAVRTLIEWAGDDPAREGLLDTPRRVARAWKEYCSGYGEDPSIHLSRTFEEVGGYDEVV LLRDIPFQSHCEHHMAPITGKASIAYLPRDRVVGISKLARVLNGYARRLQVQERLTAEVAQCIWDNLQPHGVAVVIDAQH GCMTGRGVRTPGVGMVTSRLLGCFLEDQRSRKEVLGLMGY >Mature_199_residues SELGQDLGPDGKLIVPDHVADAVRTLIEWAGDDPAREGLLDTPRRVARAWKEYCSGYGEDPSIHLSRTFEEVGGYDEVVL LRDIPFQSHCEHHMAPITGKASIAYLPRDRVVGISKLARVLNGYARRLQVQERLTAEVAQCIWDNLQPHGVAVVIDAQHG CMTGRGVRTPGVGMVTSRLLGCFLEDQRSRKEVLGLMGY
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=189, Percent_Identity=44.973544973545, Blast_Score=158, Evalue=3e-39, Organism=Homo sapiens, GI4503949, Length=189, Percent_Identity=44.973544973545, Blast_Score=158, Evalue=3e-39, Organism=Homo sapiens, GI66932970, Length=159, Percent_Identity=42.7672955974843, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI66932972, Length=149, Percent_Identity=44.9664429530201, Blast_Score=122, Evalue=1e-28, Organism=Escherichia coli, GI1788476, Length=179, Percent_Identity=38.5474860335196, Blast_Score=122, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17560486, Length=193, Percent_Identity=41.4507772020725, Blast_Score=159, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=45.6043956043956, Blast_Score=161, Evalue=6e-41, Organism=Drosophila melanogaster, GI24656782, Length=191, Percent_Identity=41.8848167539267, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24656796, Length=191, Percent_Identity=41.8848167539267, Blast_Score=143, Evalue=9e-35, Organism=Drosophila melanogaster, GI24656791, Length=191, Percent_Identity=41.8848167539267, Blast_Score=142, Evalue=1e-34,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22118; Mature: 21986
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELGQDLGPDGKLIVPDHVADAVRTLIEWAGDDPAREGLLDTPRRVARAWKEYCSGYGE CCCCCHHCCCCCCEECCHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCC DPSIHLSRTFEEVGGYDEVVLLRDIPFQSHCEHHMAPITGKASIAYLPRDRVVGISKLAR CCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH VLNGYARRLQVQERLTAEVAQCIWDNLQPHGVAVVIDAQHGCMTGRGVRTPGVGMVTSRL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH LGCFLEDQRSRKEVLGLMGY HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SELGQDLGPDGKLIVPDHVADAVRTLIEWAGDDPAREGLLDTPRRVARAWKEYCSGYGE CCCCHHCCCCCCEECCHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCC DPSIHLSRTFEEVGGYDEVVLLRDIPFQSHCEHHMAPITGKASIAYLPRDRVVGISKLAR CCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH VLNGYARRLQVQERLTAEVAQCIWDNLQPHGVAVVIDAQHGCMTGRGVRTPGVGMVTSRL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH LGCFLEDQRSRKEVLGLMGY HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]