| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ftsZ [H]
Identifier: 103487359
GI number: 103487359
Start: 1971556
End: 1973004
Strand: Reverse
Name: ftsZ [H]
Synonym: Sala_1875
Alternate gene names: 103487359
Gene position: 1973004-1971556 (Counterclockwise)
Preceding gene: 103487360
Following gene: 103487358
Centisome position: 58.98
GC content: 68.25
Gene sequence:
>1449_bases ATGAGCATCAACATTGGCCCGCCGCAGGTCGACGAGCTCAAGCCGCGCATCGCGGTGATCGGCGTCGGCGGTGCGGGCGG CAATGCCATCGCCAACATGATCGCGGCGCGCGTCGAGGGCGTCGATTTCATCGTCGCCAACACCGACGCGCAGGCGCTCA ACGCCTCGCCCGCCGAACGACGCATCCAGCTGGGGACGCAGATCACCCAGGGGCTGGGCGCGGGGTCGCGGCCCGAGGTC GGGCGCGCGGCCGCGGAGGAAAGCATCGCGCAGGTCGAAGAGGCGTTGAACGGCGCGCATATGTGTTTCGTCGCCGCGGG CATGGGCGGCGGCACCGGCACCGGCGCCGCGCCGGTGATCGCAAAGGCCGCGCGCGACCGCGGCATCCTGACCGTCGGCG TCGTGACCAAACCCTTCATGTTCGAAGGCGCGCGGCGGATGCGCTCGGCCGACGCGGGCATTGCCGAGCTTCAGGATCAC GTCGACACGCTGATCGTCATTCCGAACCAGAATCTCTTCCTTGTCGCCAACCCGAACACGACCTTCAAGGAAGCCTTCAC CATGGCGGACGAAGTGCTGCAACAGGGCGTGCGCGGCATCACCGACCTGATGGTCATGCCCGGCCTCATCAACCTCGACT TTGCCGACGTGCGCAGCGTGATGCGCGAAATGGGCAAGGCGATGATGGGCACCGGCGAGGCCGAAGGCGACGGCCGCGCG CTCGAAGCGGCGCAAAAGGCGATCGCCAACCCGCTGCTCGACGGCGTGTCGATGGCGGGCGCCAAGGGCGTCATCATTTC GATTACCGGCGGTGAGGATATGCGCCTGATGGAAGTCGACGAGGCCGCGAACCACATCCGCGAACTGGTCGATCCCGACG CCAACATCATCTGGGGCAGTGCCTTCAACGACAGCCTTGATGGCAAGATCCGCGTCTCGGTCGTCGCGACCGGCATCGAC GGTACGGGTGAGGCAGCGCAGGCGGCGCCCGCGACGCGCAGCTTTTCCTTCGCGCCCGCGCGCTCGGCGGCTCCAGCGCC CGCCGCAGAAGAGGTGGTCGAACCGGCGGTGCAGGAAGAGCCCGTCGCCGATGAGCATCCGGTTGCGCAAGATAATGACC CCGTCCCGGGCTTTTCGCTCGGCGAGACGGCCGAACCCGCGGTGACCGCGCCTGCAGAGGAAGAACCGATGGAGTTGTCG CAGGTCGCGGCAAGCTATGACGATACCGTCGGCGAGCTTGTGCTTGACGCGCCCGCGGCGCCGACGAACAGCCATGCTCC CGCGCCTGCCGAGGCTCCGGCCGAACCGCCCGCGCGCTCGATCGGCGGCGGCACGCTGTTCGAGCGCATGTCGCGCCTGT CGCGGGGCGCGGGCACGTCTGACGGCGACGAAGGAAAGGGCGACGCGGTCGACATTCCGCGTTTCCTGGGGCGGCAGAAC AACCAGTAA
Upstream 100 bases:
>100_bases TGCAATGCGGTGACAGAAAACCGGGCGGATGGACTGCCGCCCGGCCGGGTCGCAAGGTTGGGGAAGCGGCACCTGTCCGC CGCTGCAGGGAGACATTTTG
Downstream 100 bases:
>100_bases CAGGGCTTTCGGACGGCCGACCGCCGGGCTTGGCAGGCCGGAAACGGGATGATTTGCCCATGCGGCAAGCGATATTGACG GCGAAGCCGGCGCGCACACG
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MSINIGPPQVDELKPRIAVIGVGGAGGNAIANMIAARVEGVDFIVANTDAQALNASPAERRIQLGTQITQGLGAGSRPEV GRAAAEESIAQVEEALNGAHMCFVAAGMGGGTGTGAAPVIAKAARDRGILTVGVVTKPFMFEGARRMRSADAGIAELQDH VDTLIVIPNQNLFLVANPNTTFKEAFTMADEVLQQGVRGITDLMVMPGLINLDFADVRSVMREMGKAMMGTGEAEGDGRA LEAAQKAIANPLLDGVSMAGAKGVIISITGGEDMRLMEVDEAANHIRELVDPDANIIWGSAFNDSLDGKIRVSVVATGID GTGEAAQAAPATRSFSFAPARSAAPAPAAEEVVEPAVQEEPVADEHPVAQDNDPVPGFSLGETAEPAVTAPAEEEPMELS QVAASYDDTVGELVLDAPAAPTNSHAPAPAEAPAEPPARSIGGGTLFERMSRLSRGAGTSDGDEGKGDAVDIPRFLGRQN NQ
Sequences:
>Translated_482_residues MSINIGPPQVDELKPRIAVIGVGGAGGNAIANMIAARVEGVDFIVANTDAQALNASPAERRIQLGTQITQGLGAGSRPEV GRAAAEESIAQVEEALNGAHMCFVAAGMGGGTGTGAAPVIAKAARDRGILTVGVVTKPFMFEGARRMRSADAGIAELQDH VDTLIVIPNQNLFLVANPNTTFKEAFTMADEVLQQGVRGITDLMVMPGLINLDFADVRSVMREMGKAMMGTGEAEGDGRA LEAAQKAIANPLLDGVSMAGAKGVIISITGGEDMRLMEVDEAANHIRELVDPDANIIWGSAFNDSLDGKIRVSVVATGID GTGEAAQAAPATRSFSFAPARSAAPAPAAEEVVEPAVQEEPVADEHPVAQDNDPVPGFSLGETAEPAVTAPAEEEPMELS QVAASYDDTVGELVLDAPAAPTNSHAPAPAEAPAEPPARSIGGGTLFERMSRLSRGAGTSDGDEGKGDAVDIPRFLGRQN NQ >Mature_481_residues SINIGPPQVDELKPRIAVIGVGGAGGNAIANMIAARVEGVDFIVANTDAQALNASPAERRIQLGTQITQGLGAGSRPEVG RAAAEESIAQVEEALNGAHMCFVAAGMGGGTGTGAAPVIAKAARDRGILTVGVVTKPFMFEGARRMRSADAGIAELQDHV DTLIVIPNQNLFLVANPNTTFKEAFTMADEVLQQGVRGITDLMVMPGLINLDFADVRSVMREMGKAMMGTGEAEGDGRAL EAAQKAIANPLLDGVSMAGAKGVIISITGGEDMRLMEVDEAANHIRELVDPDANIIWGSAFNDSLDGKIRVSVVATGIDG TGEAAQAAPATRSFSFAPARSAAPAPAAEEVVEPAVQEEPVADEHPVAQDNDPVPGFSLGETAEPAVTAPAEEEPMELSQ VAASYDDTVGELVLDAPAAPTNSHAPAPAEAPAEPPARSIGGGTLFERMSRLSRGAGTSDGDEGKGDAVDIPRFLGRQNN Q
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=292, Percent_Identity=52.3972602739726, Blast_Score=273, Evalue=3e-74,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 49576; Mature: 49445
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINIGPPQVDELKPRIAVIGVGGAGGNAIANMIAARVEGVDFIVANTDAQALNASPAER CCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHH RIQLGTQITQGLGAGSRPEVGRAAAEESIAQVEEALNGAHMCFVAAGMGGGTGTGAAPVI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHH AKAARDRGILTVGVVTKPFMFEGARRMRSADAGIAELQDHVDTLIVIPNQNLFLVANPNT HHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCEEEEECCCC TFKEAFTMADEVLQQGVRGITDLMVMPGLINLDFADVRSVMREMGKAMMGTGEAEGDGRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH LEAAQKAIANPLLDGVSMAGAKGVIISITGGEDMRLMEVDEAANHIRELVDPDANIIWGS HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEECC AFNDSLDGKIRVSVVATGIDGTGEAAQAAPATRSFSFAPARSAAPAPAAEEVVEPAVQEE CCCCCCCCEEEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC PVADEHPVAQDNDPVPGFSLGETAEPAVTAPAEEEPMELSQVAASYDDTVGELVLDAPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHEECCCCC PTNSHAPAPAEAPAEPPARSIGGGTLFERMSRLSRGAGTSDGDEGKGDAVDIPRFLGRQN CCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC NQ CC >Mature Secondary Structure SINIGPPQVDELKPRIAVIGVGGAGGNAIANMIAARVEGVDFIVANTDAQALNASPAER CCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHH RIQLGTQITQGLGAGSRPEVGRAAAEESIAQVEEALNGAHMCFVAAGMGGGTGTGAAPVI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHH AKAARDRGILTVGVVTKPFMFEGARRMRSADAGIAELQDHVDTLIVIPNQNLFLVANPNT HHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCEEEEECCCC TFKEAFTMADEVLQQGVRGITDLMVMPGLINLDFADVRSVMREMGKAMMGTGEAEGDGRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH LEAAQKAIANPLLDGVSMAGAKGVIISITGGEDMRLMEVDEAANHIRELVDPDANIIWGS HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEECC AFNDSLDGKIRVSVVATGIDGTGEAAQAAPATRSFSFAPARSAAPAPAAEEVVEPAVQEE CCCCCCCCEEEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC PVADEHPVAQDNDPVPGFSLGETAEPAVTAPAEEEPMELSQVAASYDDTVGELVLDAPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHEECCCCC PTNSHAPAPAEAPAEPPARSIGGGTLFERMSRLSRGAGTSDGDEGKGDAVDIPRFLGRQN CCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC NQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8692812 [H]