Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487350

Identifier: 103487350

GI number: 103487350

Start: 1961285

End: 1962391

Strand: Reverse

Name: 103487350

Synonym: Sala_1866

Alternate gene names: NA

Gene position: 1962391-1961285 (Counterclockwise)

Preceding gene: 103487351

Following gene: 103487349

Centisome position: 58.66

GC content: 70.46

Gene sequence:

>1107_bases
ATGACGGGTAACAGGGGAGGGTGCGATGAGCTGGGACAGCCTGTTCCTGCTGGCGAATTATTGGGCCATCGCGGCGTGGA
TCGCGCTCGCCTTCCTGCCGCGCGGGCCAGGGACGCTCGCGCTGATCCTCTACCTCGGCGTGGCGCTGCTCTGCCTCGCT
TACACCGTGCTGATCGCCGGATTCCTCACCGGCGGCATCGACCCCGGCGGGCCGGGCGGCGGCGACTTCACGACGCTCAA
GGGCGTGATGATGCTGTTCGACAGCCCCGGCGGCGCGACGCTCGGCTGGATCCATTATCTCGCCTTCGACCTGTTCACCG
GCATGTGGATCGCGCGCGACGCCGATCAGAAGGGGTTCAGCCGCATCGCCCAATTTCCCTTCCTGCTCCTGACCCTGCTC
GTCGGGCCGGTCGGGCTGTTCGCGTGGCTGATCGTCCGCGAACGCCGCGCGCGGGCGCAGGCGAAGGCGAAGTGACGCCG
CAGCCGTGGATGCCGGGTGACGAGGGCGCGGCGGACAAGCGCCACGCGCCCGCGACCTTGCGCAACCGCGACGCCATCGC
CGCGGTGCTCGCCGACTGGCTGCCCGAGTTCGGCACGGTGCTGGAGGTTGCGAGCGGGTCGGGCGAACATGCCGTGCATT
TCGCGGCGGCCTTTCCGCACCTCCTTTGGCAACCGAGCGACCCCGACCCCGCCGGGCTGACCTCGATCGCCGCCTGGCGC
GCCGAGGCGGGGCTTGCCAATCTTGCACCGCCACTGGCACTCGATGCGGCGGCGCCCGACTGGCCGACCGGGCGCGCCGA
CGCGATCCTGTGCATCAACATGGTGCATATCAGCCCGTGGGCTGCGACGCTGGGCCTGTTCGCGGGGGCGGCGCGATTGC
TCGTGCCCGGTGCCCCGCTCATCCTCTATGGCCCCTTCATCGAACCCGATGTGCCGACCGCGGCGAGCAACCTCGACTTC
GACGCCAATCTGCGCGCGCGCGATCCGGCGTGGGGGCTGCGCGACACCGATGCGGTCAAGGCCGCCGCCGACGACGCCGG
GCTGGCCTTTGCCGAACGCCGCGCCATGCCCGCGAACAATCTGATGCTGCTGTTCCGCGGCACCTGA

Upstream 100 bases:

>100_bases
TGGCGTGGGAAGGCGATCTATAATCCATCGTCATCCCGGCGAAGGCCGGGATCTCGCCGGTGCGTCATGATTACAGGATG
AGATCCCGGCCTTCGCCGGG

Downstream 100 bases:

>100_bases
CCGATCGGGCAGGGCAGGGGATCGGCGCTTTACCTCGGCGCGCCAATCGCTAGCTTTCTATGCAACCGCGCGAACGACGC
GATTCGAGGAGAGAGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTGNRGGCDELGQPVPAGELLGHRGVDRARLPAARARDARADPLPRRGAALPRLHRADRRIPHRRHRPRRAGRRRLHDAQ
GRDDAVRQPRRRDARLDPLSRLRPVHRHVDRARRRSEGVQPHRPISLPAPDPARRAGRAVRVADRPRTPRAGAGEGEVTP
QPWMPGDEGAADKRHAPATLRNRDAIAAVLADWLPEFGTVLEVASGSGEHAVHFAAAFPHLLWQPSDPDPAGLTSIAAWR
AEAGLANLAPPLALDAAAPDWPTGRADAILCINMVHISPWAATLGLFAGAARLLVPGAPLILYGPFIEPDVPTAASNLDF
DANLRARDPAWGLRDTDAVKAAADDAGLAFAERRAMPANNLMLLFRGT

Sequences:

>Translated_368_residues
MTGNRGGCDELGQPVPAGELLGHRGVDRARLPAARARDARADPLPRRGAALPRLHRADRRIPHRRHRPRRAGRRRLHDAQ
GRDDAVRQPRRRDARLDPLSRLRPVHRHVDRARRRSEGVQPHRPISLPAPDPARRAGRAVRVADRPRTPRAGAGEGEVTP
QPWMPGDEGAADKRHAPATLRNRDAIAAVLADWLPEFGTVLEVASGSGEHAVHFAAAFPHLLWQPSDPDPAGLTSIAAWR
AEAGLANLAPPLALDAAAPDWPTGRADAILCINMVHISPWAATLGLFAGAARLLVPGAPLILYGPFIEPDVPTAASNLDF
DANLRARDPAWGLRDTDAVKAAADDAGLAFAERRAMPANNLMLLFRGT
>Mature_367_residues
TGNRGGCDELGQPVPAGELLGHRGVDRARLPAARARDARADPLPRRGAALPRLHRADRRIPHRRHRPRRAGRRRLHDAQG
RDDAVRQPRRRDARLDPLSRLRPVHRHVDRARRRSEGVQPHRPISLPAPDPARRAGRAVRVADRPRTPRAGAGEGEVTPQ
PWMPGDEGAADKRHAPATLRNRDAIAAVLADWLPEFGTVLEVASGSGEHAVHFAAAFPHLLWQPSDPDPAGLTSIAAWRA
EAGLANLAPPLALDAAAPDWPTGRADAILCINMVHISPWAATLGLFAGAARLLVPGAPLILYGPFIEPDVPTAASNLDFD
ANLRARDPAWGLRDTDAVKAAADDAGLAFAERRAMPANNLMLLFRGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=199, Percent_Identity=47.2361809045226, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI93102391, Length=138, Percent_Identity=49.2753623188406, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI93102401, Length=133, Percent_Identity=45.8646616541353, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71998087, Length=199, Percent_Identity=36.1809045226131, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI28574095, Length=203, Percent_Identity=35.4679802955665, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39801; Mature: 39669

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNRGGCDELGQPVPAGELLGHRGVDRARLPAARARDARADPLPRRGAALPRLHRADRR
CCCCCCCHHHHCCCCCHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHC
IPHRRHRPRRAGRRRLHDAQGRDDAVRQPRRRDARLDPLSRLRPVHRHVDRARRRSEGVQ
CCHHHCCCHHHHHHHHHHCCCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PHRPISLPAPDPARRAGRAVRVADRPRTPRAGAGEGEVTPQPWMPGDEGAADKRHAPATL
CCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RNRDAIAAVLADWLPEFGTVLEVASGSGEHAVHFAAAFPHLLWQPSDPDPAGLTSIAAWR
HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AEAGLANLAPPLALDAAAPDWPTGRADAILCINMVHISPWAATLGLFAGAARLLVPGAPL
HHCCHHHCCCCCEECCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCE
ILYGPFIEPDVPTAASNLDFDANLRARDPAWGLRDTDAVKAAADDAGLAFAERRAMPANN
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCC
LMLLFRGT
EEEEEECC
>Mature Secondary Structure 
TGNRGGCDELGQPVPAGELLGHRGVDRARLPAARARDARADPLPRRGAALPRLHRADRR
CCCCCCHHHHCCCCCHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHC
IPHRRHRPRRAGRRRLHDAQGRDDAVRQPRRRDARLDPLSRLRPVHRHVDRARRRSEGVQ
CCHHHCCCHHHHHHHHHHCCCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PHRPISLPAPDPARRAGRAVRVADRPRTPRAGAGEGEVTPQPWMPGDEGAADKRHAPATL
CCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RNRDAIAAVLADWLPEFGTVLEVASGSGEHAVHFAAAFPHLLWQPSDPDPAGLTSIAAWR
HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AEAGLANLAPPLALDAAAPDWPTGRADAILCINMVHISPWAATLGLFAGAARLLVPGAPL
HHCCHHHCCCCCEECCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCE
ILYGPFIEPDVPTAASNLDFDANLRARDPAWGLRDTDAVKAAADDAGLAFAERRAMPANN
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCC
LMLLFRGT
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA