| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487344
Identifier: 103487344
GI number: 103487344
Start: 1954632
End: 1955975
Strand: Reverse
Name: 103487344
Synonym: Sala_1860
Alternate gene names: NA
Gene position: 1955975-1954632 (Counterclockwise)
Preceding gene: 103487345
Following gene: 103487343
Centisome position: 58.47
GC content: 69.87
Gene sequence:
>1344_bases ATGAATGATTTGGCGGAACGGCTGGCGACCGCGATGCGGCGATTCGCCGGGGAGGGTGAACTTTCCGCACTTTCGCGGCT GTCGGGCGGCGCGAATATGGAAAGCTGGGCGTTCGAGTGGAGCAGCGGGGGACGCGCTGCACCCTATGTCCTGCGGCGCG CGCCGTCGGCGGCCTATATGGCCGATCGCCCCTTCGGCCACGCCGACGAGGCGGCGCTGGTGATCGCGGCGCGGGCGGGC GGGGTGAAGGCGCCTGAAGTGGTGGGTGTGCTGGGCGATGCCGATGGCCTCGGCACGGGCTATGTCATGCGCCGCGTGAT GGCGGAGGTGGCGCCGACGAAGATTCTTGGCGATCCGCCGCCGTCGCTGCTCGCCGATCTGGGGCGCGAACTGGCCCGCA TCCACGCCATTCCGCTCGCCACGATCCCTCCGGCGATTCCGCACATGGACACGCGCGAGGCGCTCGCGGCGCTCAAGGCG CGCTTCTTCGACTATGGCGGCGACCGGCCGGTCATCGCGCTCGCGATCCGATGGTGCGAGGATCATCTGCCCGCGCCCGC CGATCCGGTGCTCGTCCATGGCGACTATCGCATGGGCAATGTCATGGTCGATGCGAACGGGCTTGCCGCGGTGCTCGACT GGGAATTGGCGCATTTGGGCGACGCGCATGAAGATCTCGCCTTTGGCTGCATGACGGTGTGGCGCTTCGGGCGGCTCGAC AGGCCGGCCCTTGGGTTGGGCAGTCTGGACGATTATTTTGCGGCCTATGAGGCGGGGGGCGGCGGTCCCGTCGATCGCGA CCGCTTCCGCTTCTGGCTGATCTATCGCACGCTCTGGTGGGCGCTCGGCTGCCTCCAGATGGGCGAGGCGTGGCGGAGCG GCGCGGACAGGACCGTCGAGCGCGTCGTCGTCGGGCGGCGCACCGCCGAACAGGAACTGGATTTGGTGCGGCTGCTGGAG ACCGAGGCACCCGAATCCGAGCGCGCCCGCCCGCTGCCCCCTTCGCAGCCCGCCGCGCCCGCGCCGACCGGCGAGCCGAC GAACCGCGAGATGGTGCAGGCGGTGCGCGACTGGATCGAAGGCGCGATCAAGCCGCACGCCGAGGGCCATGCGAAGTTCG AAACGGTGGTCGCGATGAACGCGCTCGGGATCGTGCTGCGCGACCTCGATGCCGGAACGCGCGCCGAGGACAGGGCGCTG ACGGACGAACTGCTGTCGGGCACGGCGACGCTCGCGCGGCCGGGCCTCCTCGCAAAGCTGCGCCGCGCGGTGCTCGACAA ATGCGCGGTCGATAGTCCGAAATATGCCGCGCTCGCGGCGGCGCGCGCCGAATGGCGCCAATAA
Upstream 100 bases:
>100_bases ATAGCATCCGCCGGTCGAAAGCGACAGGTTCGGTTCGTTGGGGATTGCAAATGTGGGGATTTTCCCATTGGTTCGACCGC ATGGGCTGCGGGGTGTGGGG
Downstream 100 bases:
>100_bases GCGACTAGGGAGAGAGACATGGATTTTGCGGTTCCGGCCGATTTGCAGGCCTATCTGGACGAACTCGACGCCTTCATCGA AGCGGAGATCAAGCCGCTCG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Tyrosine Protein KinaseAminoglycoside Phosphotransferase; FadE36 Aminoglycoside Phosphotransferase
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYMADRPFGHADEAALVIAARAG GVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPPPSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKA RFFDYGGDRPVIALAIRWCEDHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVERVVVGRRTAEQELDLVRLLE TEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIEGAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRAL TDELLSGTATLARPGLLAKLRRAVLDKCAVDSPKYAALAAARAEWRQ
Sequences:
>Translated_447_residues MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYMADRPFGHADEAALVIAARAG GVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPPPSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKA RFFDYGGDRPVIALAIRWCEDHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVERVVVGRRTAEQELDLVRLLE TEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIEGAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRAL TDELLSGTATLARPGLLAKLRRAVLDKCAVDSPKYAALAAARAEWRQ >Mature_447_residues MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYMADRPFGHADEAALVIAARAG GVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPPPSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKA RFFDYGGDRPVIALAIRWCEDHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVERVVVGRRTAEQELDLVRLLE TEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIEGAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRAL TDELLSGTATLARPGLLAKLRRAVLDKCAVDSPKYAALAAARAEWRQ
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48330; Mature: 48330
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYM CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHHHCCCCHHHH ADRPFGHADEAALVIAARAGGVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPP CCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCC PSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKARFFDYGGDRPVIALAIRWCE HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH DHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD HCCCCCCCCEEEECCEEECCEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCC RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVE CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RVVVGRRTAEQELDLVRLLETEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIE HHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRALTDELLSGTATLARPGLLAKL HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHH RRAVLDKCAVDSPKYAALAAARAEWRQ HHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNDLAERLATAMRRFAGEGELSALSRLSGGANMESWAFEWSSGGRAAPYVLRRAPSAAYM CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHHHCCCCHHHH ADRPFGHADEAALVIAARAGGVKAPEVVGVLGDADGLGTGYVMRRVMAEVAPTKILGDPP CCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCC PSLLADLGRELARIHAIPLATIPPAIPHMDTREALAALKARFFDYGGDRPVIALAIRWCE HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH DHLPAPADPVLVHGDYRMGNVMVDANGLAAVLDWELAHLGDAHEDLAFGCMTVWRFGRLD HCCCCCCCCEEEECCEEECCEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCC RPALGLGSLDDYFAAYEAGGGGPVDRDRFRFWLIYRTLWWALGCLQMGEAWRSGADRTVE CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RVVVGRRTAEQELDLVRLLETEAPESERARPLPPSQPAAPAPTGEPTNREMVQAVRDWIE HHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GAIKPHAEGHAKFETVVAMNALGIVLRDLDAGTRAEDRALTDELLSGTATLARPGLLAKL HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHH RRAVLDKCAVDSPKYAALAAARAEWRQ HHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA