| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mdoC [C]
Identifier: 103487337
GI number: 103487337
Start: 1947293
End: 1948447
Strand: Reverse
Name: mdoC [C]
Synonym: Sala_1853
Alternate gene names: 103487337
Gene position: 1948447-1947293 (Counterclockwise)
Preceding gene: 103487338
Following gene: 103487336
Centisome position: 58.25
GC content: 65.37
Gene sequence:
>1155_bases ATGATGAAGGGAGGGGGCTGCATGACCACGCAACGCCACTACGGCATGGACTGGCTGCGCATCGGCGCCTTCGCGCTGCT GATCCTCTATCATATCGGCATGTATTTCGTGCCGTGGGATTGGCATGTGAAGATCGATCCGACGATCGATTGGGTTGCGT TGCCGATGTACGCGACGAATGGCTGGCGGCTTCCATTGCTGTTTCTGGTGTCGGGTTATGCGAATGCTGCGTTGCTGGTG AAGCTGGACGGCGCCGGGGCGTTCGCGCGGTCGCGCAGCGCGCGGTTGCTGATCCCGCTGGCGTTCGGGATCATCGTGGT CATCCCGCCGCAACCATGGGTCGAGCTGGTCGGCCAGCATGGCTATCCGCACGGCTTTCTGCGCTTCTGGACGTCGGACT ATTTCCGCTTCGGCACGCTGGGCGGGATCGTGCTGCCGACCTGGCAGCATCTGTGGTTCGTTGTCTATCTGTGGACCTAT ACGATGCTCGCCGCGCTGCTGCTCGCGGCGGTGCCCGCGGCGATGCGGGGGTGGATCGCCGATGGCGCGGCGCGGCTGCT GTCGGGCTGGCGGCTGCTGATCGTGCCGATGCTGTGGTGGCTCGCGGTTTACGGCGCCTTTCCTGAGCATGACGAGACGC ATGCGCTGTTCGACGACGGGCCGGCGCATCTCCGCTATCTTATGGCTTTCGGCGCGGGCTGGCTGCTGCGCGTGCGGCCC GCCCTGTTCGCGGCCGTCGCCCGCTGCTGGAAGGTCGCCGCGCTGCTTGGCCTGCTGGCGTTCCTGCCGATCATGTGGGT CGAATCGACTTGGTCCGGCGACATGCGCGCGCCCGACTGGGCGATCGCGCTATTCCATGTCGCGCGGCGGGTGCAGGGCT GGGTAGCGATCGTCGCGCTCATCGGCGTCGCCGACCGGTACTGGAACCGCGACCATCCAAAACGCGCGATGTTCGCCGAG GCGGTCTTCCCCTTTTACATCATTCACCAGACGATCATCGTCGTCGCCGGATGGTATCTGCTGCGAGCGGGCGTGGCGGC GTTGCCATCCTTCCTGATCCTGCTCGCGGCGACGATGCTGGGATGCTGGCTTTTCTATGCGATTGGGCGCAGCATCGGCT GGCTGCGGCCGCTGATCGGGCTCCAACGGCGATAG
Upstream 100 bases:
>100_bases TTCGTCCTACCGGTGGAGACCGGGATCTCGATCTTGCGCCGGATCGCCACGGCGAGATCCCGGCCTTCGCCGGGATGACG GACGGCAGGGTGGTGGAGAA
Downstream 100 bases:
>100_bases GGGAGAAAAGCCATGGGAGCGGCAAAGGGGATTTTGGCGGTGGTCGGCGTCGCGCTGGTGCTGGTCGGGACGCTGTGGGC GTTGCAGGGGCTGGACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein; Acetyltransferase; Transmembrane Protein; Acyltransferase Putative; 3 4-Dihydroxy-2-Butanone 4-Phosphate Synthase
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATNGWRLPLLFLVSGYANAALLV KLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQHGYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTY TMLAALLLAAVPAAMRGWIADGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVALIGVADRYWNRDHPKRAMFAE AVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATMLGCWLFYAIGRSIGWLRPLIGLQRR
Sequences:
>Translated_384_residues MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATNGWRLPLLFLVSGYANAALLV KLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQHGYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTY TMLAALLLAAVPAAMRGWIADGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVALIGVADRYWNRDHPKRAMFAE AVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATMLGCWLFYAIGRSIGWLRPLIGLQRR >Mature_384_residues MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATNGWRLPLLFLVSGYANAALLV KLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQHGYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTY TMLAALLLAAVPAAMRGWIADGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVALIGVADRYWNRDHPKRAMFAE AVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATMLGCWLFYAIGRSIGWLRPLIGLQRR
Specific function: Necessary For The Succinyl Substitution Of Periplasmic Glucans. Could Catalyze The Transfer Of Succinyl Residues From The Cytoplasmic Side Of The Membrane To The Nascent Glucan Backbones On The Periplasmic Side Of The Membrane. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.-.- [C]
Molecular weight: Translated: 43433; Mature: 43433
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATN CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEEEEEECC GWRLPLLFLVSGYANAALLVKLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQH CCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCEEEEEEECCEEEEECCCHHHHHHCCC GYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTYTMLAALLLAAVPAAMRGWIA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGVADRYWNRDHPKRAMFAEAVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATML HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCWLFYAIGRSIGWLRPLIGLQRR HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMKGGGCMTTQRHYGMDWLRIGAFALLILYHIGMYFVPWDWHVKIDPTIDWVALPMYATN CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEEEEEECC GWRLPLLFLVSGYANAALLVKLDGAGAFARSRSARLLIPLAFGIIVVIPPQPWVELVGQH CCCHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCEEEEEEECCEEEEECCCHHHHHHCCC GYPHGFLRFWTSDYFRFGTLGGIVLPTWQHLWFVVYLWTYTMLAALLLAAVPAAMRGWIA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGAARLLSGWRLLIVPMLWWLAVYGAFPEHDETHALFDDGPAHLRYLMAFGAGWLLRVRP HHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH ALFAAVARCWKVAALLGLLAFLPIMWVESTWSGDMRAPDWAIALFHVARRVQGWVAIVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGVADRYWNRDHPKRAMFAEAVFPFYIIHQTIIVVAGWYLLRAGVAALPSFLILLAATML HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCWLFYAIGRSIGWLRPLIGLQRR HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA