| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487322
Identifier: 103487322
GI number: 103487322
Start: 1932591
End: 1932977
Strand: Reverse
Name: 103487322
Synonym: Sala_1838
Alternate gene names: NA
Gene position: 1932977-1932591 (Counterclockwise)
Preceding gene: 103487323
Following gene: 103487321
Centisome position: 57.78
GC content: 67.18
Gene sequence:
>387_bases ATGTTCAGCCATGTGGCGCTGGGGTCGAACGACATCGCAGCGAGCAAGAGGTTTTACGATGCGATCCTGGGCGTCCTCGG CGCGGCAGAGGGCGTGATCGACGAGCGCGGGCGCCTGGTCTACATGCACGCGGGCGGGCGGCTGATCGTCACGCATCCGG TCAATGGCGACAAGGCGGAGTGCGGCAACGGGCATACGCTGGGGTTCCTCGCGCCGTCGACCGATGCGGTCGACGCATGG CACGCGGCGGGGGTTGCCAACGGCGGGACCACGACCGAAGATCCGCCGGGCATCCGCCATGCGACCGAAGGGCGGGTCGT CTATCTCGCCTATCTGCGCGATCCGGCGGGCAACAAGCTTTGCGCCACCCACAAGATTTCGGGCTGA
Upstream 100 bases:
>100_bases CCCATGTCATGGGCCTCGAAGAGATCAACAAGGGCTTCGACCTGATGCACGCGGGAGAGAGCATCCGGTCGGTCGTCGTA TACTGAAGGAAAGGCTTTCC
Downstream 100 bases:
>100_bases CATGACCGGGGGGAACGGGCCCGCTTATGTGCTGACCTTCAGCTGTGCCGATGCGGTGGGCATCGTCGCCGCGGTGACGG GGCTGCTCGCGGACCGCGAC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Dioxygenase; Lactoylglutathione Lyase; Lactoylglutathione Lyase Protein; Glyoxalase/Dioxygenase; Glyoxalase/Bleomycin Resistance; Isocitrate Dehydrogenase; Glyoxalase-Family Protein; Glyoxalase/Bleomycin Resistance Dioxygenase
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MFSHVALGSNDIAASKRFYDAILGVLGAAEGVIDERGRLVYMHAGGRLIVTHPVNGDKAECGNGHTLGFLAPSTDAVDAW HAAGVANGGTTTEDPPGIRHATEGRVVYLAYLRDPAGNKLCATHKISG
Sequences:
>Translated_128_residues MFSHVALGSNDIAASKRFYDAILGVLGAAEGVIDERGRLVYMHAGGRLIVTHPVNGDKAECGNGHTLGFLAPSTDAVDAW HAAGVANGGTTTEDPPGIRHATEGRVVYLAYLRDPAGNKLCATHKISG >Mature_128_residues MFSHVALGSNDIAASKRFYDAILGVLGAAEGVIDERGRLVYMHAGGRLIVTHPVNGDKAECGNGHTLGFLAPSTDAVDAW HAAGVANGGTTTEDPPGIRHATEGRVVYLAYLRDPAGNKLCATHKISG
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13308; Mature: 13308
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSHVALGSNDIAASKRFYDAILGVLGAAEGVIDERGRLVYMHAGGRLIVTHPVNGDKAE CCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCCC CGNGHTLGFLAPSTDAVDAWHAAGVANGGTTTEDPPGIRHATEGRVVYLAYLRDPAGNKL CCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE CATHKISG EEEEECCC >Mature Secondary Structure MFSHVALGSNDIAASKRFYDAILGVLGAAEGVIDERGRLVYMHAGGRLIVTHPVNGDKAE CCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCCC CGNGHTLGFLAPSTDAVDAWHAAGVANGGTTTEDPPGIRHATEGRVVYLAYLRDPAGNKL CCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE CATHKISG EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA