| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487320
Identifier: 103487320
GI number: 103487320
Start: 1931221
End: 1931601
Strand: Reverse
Name: 103487320
Synonym: Sala_1836
Alternate gene names: NA
Gene position: 1931601-1931221 (Counterclockwise)
Preceding gene: 103487321
Following gene: 103487319
Centisome position: 57.74
GC content: 63.78
Gene sequence:
>381_bases GTGTACAGTCACAATATGGTCGGATCGAACGACCTGGAGGCATCGAAAAGATTCTATGACGCGACCTTTCAGGCGATCGG CGGCAAGCCCGGCATCGTCGACGACAAGGGACGCCTGATCTATATGCACAAGGGTGGGCTGTTCCTCGTCACCGCGCCGA TCGACGGCCAGCCGGCGACCCCGGGCAATGGCTGCACCGTCGGTTTCGCGATGGACACGCCCGAACAGGCCGATGCCTGG CACAAGGCGGGGGTCGAAAATGGCGGCACCGCCATCGAGGATCCACCGGGCATCCGCGAAGGCGGCTTCGGCCAGCTCTA CCTTGCCTATCTGCGCGATCCGTCGGGCAACAAGCTCTGCGCGCTGCATCGCGTCGCCTGA
Upstream 100 bases:
>100_bases CTCAAAGGCCGCTCGCGTCCCGACTTCGCTCGACACCGGCGGGAAGGTAGGGCAGCGTAGGTAGCGAATCGCAACCAGAA TATCAGGAGGAGGGAAAGCC
Downstream 100 bases:
>100_bases GGATCGTTCGTGCGCGGCGAGGCGGGATTGCTGGCGGACCTTGATGCGCTTGCCATCCCCTTCGCCGCGCATGAGCATGA GGCGGTGTTCACCGTCGCCG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Dioxygenase; Lactoylglutathione Lyase; Lactoylglutathione Lyase-Like Lyase; Glyoxalase/Dioxygenase; Glyoxalase/Bleomycin Resistance; Glyoxalase-Family Protein; Glyoxalase/Bleomycin Resistance Dioxygenase; Lactoylglutathione Lyase Protein; Dioxygenase-Family Protein
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MYSHNMVGSNDLEASKRFYDATFQAIGGKPGIVDDKGRLIYMHKGGLFLVTAPIDGQPATPGNGCTVGFAMDTPEQADAW HKAGVENGGTAIEDPPGIREGGFGQLYLAYLRDPSGNKLCALHRVA
Sequences:
>Translated_126_residues MYSHNMVGSNDLEASKRFYDATFQAIGGKPGIVDDKGRLIYMHKGGLFLVTAPIDGQPATPGNGCTVGFAMDTPEQADAW HKAGVENGGTAIEDPPGIREGGFGQLYLAYLRDPSGNKLCALHRVA >Mature_126_residues MYSHNMVGSNDLEASKRFYDATFQAIGGKPGIVDDKGRLIYMHKGGLFLVTAPIDGQPATPGNGCTVGFAMDTPEQADAW HKAGVENGGTAIEDPPGIREGGFGQLYLAYLRDPSGNKLCALHRVA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13382; Mature: 13382
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSHNMVGSNDLEASKRFYDATFQAIGGKPGIVDDKGRLIYMHKGGLFLVTAPIDGQPAT CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCEEEEECCCCCCCCC PGNGCTVGFAMDTPEQADAWHKAGVENGGTAIEDPPGIREGGFGQLYLAYLRDPSGNKLC CCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE ALHRVA EEEECC >Mature Secondary Structure MYSHNMVGSNDLEASKRFYDATFQAIGGKPGIVDDKGRLIYMHKGGLFLVTAPIDGQPAT CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCEEEEECCCCCCCCC PGNGCTVGFAMDTPEQADAWHKAGVENGGTAIEDPPGIREGGFGQLYLAYLRDPSGNKLC CCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE ALHRVA EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA